Gene : 101169 S. moellendorffii v1.0
Defline:  (1 of 3) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  205
Name:  ? 101169 Secondary Identifier:  ? PAC:15423186
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
101169 0.5kb upstream 0.5kb upstream 743 true scaffold_24: 1397330-1398072 Selaginella moellendorffii
101169 0.5kb upstream 0.5kb upstream 500 false scaffold_24: 1397573-1398072 Selaginella moellendorffii
101169 0.5kb downstream 0.5kb downstream 743 true scaffold_24: 1396830-1397572 Selaginella moellendorffii
101169 0.5kb downstream 0.5kb downstream 500 false scaffold_24: 1396830-1397329 Selaginella moellendorffii
101169 1.0kb upstream 1.0kb upstream 1243 true scaffold_24: 1397330-1398572 Selaginella moellendorffii
101169 1.0kb upstream 1.0kb upstream 1000 false scaffold_24: 1397573-1398572 Selaginella moellendorffii
101169 1.0kb downstream 1.0kb downstream 1243 true scaffold_24: 1396330-1397572 Selaginella moellendorffii
101169 1.0kb downstream 1.0kb downstream 1000 false scaffold_24: 1396330-1397329 Selaginella moellendorffii
101169 2.0kb upstream 2.0kb upstream 2243 true scaffold_24: 1397330-1399572 Selaginella moellendorffii
101169 2.0kb upstream 2.0kb upstream 2000 false scaffold_24: 1397573-1399572 Selaginella moellendorffii
101169 2.0kb downstream 2.0kb downstream 2243 true scaffold_24: 1395330-1397572 Selaginella moellendorffii
101169 2.0kb downstream 2.0kb downstream 2000 false scaffold_24: 1395330-1397329 Selaginella moellendorffii
101169 5.0kb upstream 5.0kb upstream 5243 true scaffold_24: 1397330-1402572 Selaginella moellendorffii
101169 5.0kb upstream 5.0kb upstream 5000 false scaffold_24: 1397573-1402572 Selaginella moellendorffii
101169 5.0kb downstream 5.0kb downstream 5243 true scaffold_24: 1392330-1397572 Selaginella moellendorffii
101169 5.0kb downstream 5.0kb downstream 5000 false scaffold_24: 1392330-1397329 Selaginella moellendorffii
101169 10.0kb upstream 10.0kb upstream 10243 true scaffold_24: 1397330-1407572 Selaginella moellendorffii
101169 10.0kb upstream 10.0kb upstream 10000 false scaffold_24: 1397573-1407572 Selaginella moellendorffii
101169 10.0kb downstream 10.0kb downstream 10243 true scaffold_24: 1387330-1397572 Selaginella moellendorffii
101169 10.0kb downstream 10.0kb downstream 10000 false scaffold_24: 1387330-1397329 Selaginella moellendorffii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121317492 5274 Embryophyte Singleton cluster - no MSA
123354596 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain