Gene : Brast01G010700 B. stacei v1.1
Defline:  (1 of 2) PTHR11851//PTHR11851:SF141 - METALLOPROTEASE Genomic Order:  107
Name:  ? Brast01G010700 Secondary Identifier:  ? PAC:32880907
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PWY-3781 Brachypodium stacei pathologic  
Bstacei PWY-7279 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast01G010700 0.5kb upstream 0.5kb upstream 4195 true Chr01: 498449-502643 Brachypodium stacei
Brast01G010700 0.5kb upstream 0.5kb upstream 500 false Chr01: 498449-498948 Brachypodium stacei
Brast01G010700 0.5kb downstream 0.5kb downstream 4195 true Chr01: 498949-503143 Brachypodium stacei
Brast01G010700 0.5kb downstream 0.5kb downstream 500 false Chr01: 502644-503143 Brachypodium stacei
Brast01G010700 1.0kb upstream 1.0kb upstream 4695 true Chr01: 497949-502643 Brachypodium stacei
Brast01G010700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 497949-498948 Brachypodium stacei
Brast01G010700 1.0kb downstream 1.0kb downstream 4695 true Chr01: 498949-503643 Brachypodium stacei
Brast01G010700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 502644-503643 Brachypodium stacei
Brast01G010700 2.0kb upstream 2.0kb upstream 5695 true Chr01: 496949-502643 Brachypodium stacei
Brast01G010700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 496949-498948 Brachypodium stacei
Brast01G010700 2.0kb downstream 2.0kb downstream 5695 true Chr01: 498949-504643 Brachypodium stacei
Brast01G010700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 502644-504643 Brachypodium stacei
Brast01G010700 5.0kb upstream 5.0kb upstream 8695 true Chr01: 493949-502643 Brachypodium stacei
Brast01G010700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 493949-498948 Brachypodium stacei
Brast01G010700 5.0kb downstream 5.0kb downstream 8695 true Chr01: 498949-507643 Brachypodium stacei
Brast01G010700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 502644-507643 Brachypodium stacei
Brast01G010700 10.0kb upstream 10.0kb upstream 13695 true Chr01: 488949-502643 Brachypodium stacei
Brast01G010700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 488949-498948 Brachypodium stacei
Brast01G010700 10.0kb downstream 10.0kb downstream 13695 true Chr01: 498949-512643 Brachypodium stacei
Brast01G010700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 502644-512643 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577730 5269 Grass View MSA
122050410 5273 Angiosperm View MSA
121350423 5274 Embryophyte View MSA
123425006 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain