Gene : Brast01G408500 B. stacei v1.1
Defline:  (1 of 2) 2.3.1.9 - Acetyl-CoA C-acetyltransferase / Acetoacetyl-CoA thiolase Genomic Order:  4085
Name:  ? Brast01G408500 Secondary Identifier:  ? PAC:32878413
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei ILEUDEG-PWY Brachypodium stacei pathologic  
Bstacei PWY-5910 Brachypodium stacei pathologic  
Bstacei PWY-922 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast01G408500 0.5kb upstream 0.5kb upstream 4951 true Chr01: 29686234-29691184 Brachypodium stacei
Brast01G408500 0.5kb upstream 0.5kb upstream 500 false Chr01: 29690685-29691184 Brachypodium stacei
Brast01G408500 0.5kb downstream 0.5kb downstream 4951 true Chr01: 29685734-29690684 Brachypodium stacei
Brast01G408500 0.5kb downstream 0.5kb downstream 500 false Chr01: 29685734-29686233 Brachypodium stacei
Brast01G408500 1.0kb upstream 1.0kb upstream 5451 true Chr01: 29686234-29691684 Brachypodium stacei
Brast01G408500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 29690685-29691684 Brachypodium stacei
Brast01G408500 1.0kb downstream 1.0kb downstream 5451 true Chr01: 29685234-29690684 Brachypodium stacei
Brast01G408500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 29685234-29686233 Brachypodium stacei
Brast01G408500 2.0kb upstream 2.0kb upstream 6451 true Chr01: 29686234-29692684 Brachypodium stacei
Brast01G408500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 29690685-29692684 Brachypodium stacei
Brast01G408500 2.0kb downstream 2.0kb downstream 6451 true Chr01: 29684234-29690684 Brachypodium stacei
Brast01G408500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 29684234-29686233 Brachypodium stacei
Brast01G408500 5.0kb upstream 5.0kb upstream 9451 true Chr01: 29686234-29695684 Brachypodium stacei
Brast01G408500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 29690685-29695684 Brachypodium stacei
Brast01G408500 5.0kb downstream 5.0kb downstream 9451 true Chr01: 29681234-29690684 Brachypodium stacei
Brast01G408500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 29681234-29686233 Brachypodium stacei
Brast01G408500 10.0kb upstream 10.0kb upstream 14451 true Chr01: 29686234-29700684 Brachypodium stacei
Brast01G408500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 29690685-29700684 Brachypodium stacei
Brast01G408500 10.0kb downstream 10.0kb downstream 14451 true Chr01: 29676234-29690684 Brachypodium stacei
Brast01G408500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 29676234-29686233 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570136 5269 Grass View MSA
122045789 5273 Angiosperm View MSA
121344005 5274 Embryophyte View MSA
123427573 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain