Gene : Brast01G289400 B. stacei v1.1
Defline:  (1 of 1) PTHR10742:SF294 - PROTOPORPHYRINOGEN OXIDASE 1, CHLOROPLASTIC Genomic Order:  2894
Name:  ? Brast01G289400 Secondary Identifier:  ? PAC:32879684
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei CHLOROPHYLL-SYN Brachypodium stacei pathologic  
Bstacei HEME-BIOSYNTHESIS-II Brachypodium stacei pathologic  
Bstacei PWY-5918 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast01G289400 0.5kb upstream 0.5kb upstream 4688 true Chr01: 21611846-21616533 Brachypodium stacei
Brast01G289400 0.5kb upstream 0.5kb upstream 500 false Chr01: 21616034-21616533 Brachypodium stacei
Brast01G289400 0.5kb downstream 0.5kb downstream 4688 true Chr01: 21611346-21616033 Brachypodium stacei
Brast01G289400 0.5kb downstream 0.5kb downstream 500 false Chr01: 21611346-21611845 Brachypodium stacei
Brast01G289400 1.0kb upstream 1.0kb upstream 5188 true Chr01: 21611846-21617033 Brachypodium stacei
Brast01G289400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 21616034-21617033 Brachypodium stacei
Brast01G289400 1.0kb downstream 1.0kb downstream 5188 true Chr01: 21610846-21616033 Brachypodium stacei
Brast01G289400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 21610846-21611845 Brachypodium stacei
Brast01G289400 2.0kb upstream 2.0kb upstream 6188 true Chr01: 21611846-21618033 Brachypodium stacei
Brast01G289400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 21616034-21618033 Brachypodium stacei
Brast01G289400 2.0kb downstream 2.0kb downstream 6188 true Chr01: 21609846-21616033 Brachypodium stacei
Brast01G289400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 21609846-21611845 Brachypodium stacei
Brast01G289400 5.0kb upstream 5.0kb upstream 9188 true Chr01: 21611846-21621033 Brachypodium stacei
Brast01G289400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 21616034-21621033 Brachypodium stacei
Brast01G289400 5.0kb downstream 5.0kb downstream 9188 true Chr01: 21606846-21616033 Brachypodium stacei
Brast01G289400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 21606846-21611845 Brachypodium stacei
Brast01G289400 10.0kb upstream 10.0kb upstream 14188 true Chr01: 21611846-21626033 Brachypodium stacei
Brast01G289400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 21616034-21626033 Brachypodium stacei
Brast01G289400 10.0kb downstream 10.0kb downstream 14188 true Chr01: 21601846-21616033 Brachypodium stacei
Brast01G289400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 21601846-21611845 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578763 5269 Grass View MSA
122041725 5273 Angiosperm View MSA
121347394 5274 Embryophyte View MSA
123424000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain