Gene : Brast01G264800 B. stacei v1.1
Defline:  (1 of 2) 1.1.1.25 - Shikimate dehydrogenase / Shikimate:NADP(+) oxidoreductase Genomic Order:  2648
Name:  ? Brast01G264800 Secondary Identifier:  ? PAC:32878101
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei ARO-PWY Brachypodium stacei pathologic  
Bstacei PWY-6163 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast01G264800 0.5kb upstream 0.5kb upstream 12068 true Chr01: 19550689-19562756 Brachypodium stacei
Brast01G264800 0.5kb upstream 0.5kb upstream 500 false Chr01: 19562257-19562756 Brachypodium stacei
Brast01G264800 0.5kb downstream 0.5kb downstream 12068 true Chr01: 19550189-19562256 Brachypodium stacei
Brast01G264800 0.5kb downstream 0.5kb downstream 500 false Chr01: 19550189-19550688 Brachypodium stacei
Brast01G264800 1.0kb upstream 1.0kb upstream 12568 true Chr01: 19550689-19563256 Brachypodium stacei
Brast01G264800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 19562257-19563256 Brachypodium stacei
Brast01G264800 1.0kb downstream 1.0kb downstream 12568 true Chr01: 19549689-19562256 Brachypodium stacei
Brast01G264800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 19549689-19550688 Brachypodium stacei
Brast01G264800 2.0kb upstream 2.0kb upstream 13568 true Chr01: 19550689-19564256 Brachypodium stacei
Brast01G264800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 19562257-19564256 Brachypodium stacei
Brast01G264800 2.0kb downstream 2.0kb downstream 13568 true Chr01: 19548689-19562256 Brachypodium stacei
Brast01G264800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 19548689-19550688 Brachypodium stacei
Brast01G264800 5.0kb upstream 5.0kb upstream 16568 true Chr01: 19550689-19567256 Brachypodium stacei
Brast01G264800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 19562257-19567256 Brachypodium stacei
Brast01G264800 5.0kb downstream 5.0kb downstream 16568 true Chr01: 19545689-19562256 Brachypodium stacei
Brast01G264800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 19545689-19550688 Brachypodium stacei
Brast01G264800 10.0kb upstream 10.0kb upstream 21568 true Chr01: 19550689-19572256 Brachypodium stacei
Brast01G264800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 19562257-19572256 Brachypodium stacei
Brast01G264800 10.0kb downstream 10.0kb downstream 21568 true Chr01: 19540689-19562256 Brachypodium stacei
Brast01G264800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 19540689-19550688 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570353 5269 Grass View MSA
122045026 5273 Angiosperm View MSA
121345779 5274 Embryophyte View MSA
123427556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain