Gene : Brast01G124300 B. stacei v1.1
Defline:  (1 of 2) PTHR12358//PTHR12358:SF42 - SPHINGOSINE KINASE Genomic Order:  1243
Name:  ? Brast01G124300 Secondary Identifier:  ? PAC:32880754
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PWY-5129 Brachypodium stacei pathologic  
Bstacei PWY-6483 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast01G124300 0.5kb upstream 0.5kb upstream 8126 true Chr01: 7512911-7521036 Brachypodium stacei
Brast01G124300 0.5kb upstream 0.5kb upstream 500 false Chr01: 7512911-7513410 Brachypodium stacei
Brast01G124300 0.5kb downstream 0.5kb downstream 8126 true Chr01: 7513411-7521536 Brachypodium stacei
Brast01G124300 0.5kb downstream 0.5kb downstream 500 false Chr01: 7521037-7521536 Brachypodium stacei
Brast01G124300 1.0kb upstream 1.0kb upstream 8626 true Chr01: 7512411-7521036 Brachypodium stacei
Brast01G124300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 7512411-7513410 Brachypodium stacei
Brast01G124300 1.0kb downstream 1.0kb downstream 8626 true Chr01: 7513411-7522036 Brachypodium stacei
Brast01G124300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 7521037-7522036 Brachypodium stacei
Brast01G124300 2.0kb upstream 2.0kb upstream 9626 true Chr01: 7511411-7521036 Brachypodium stacei
Brast01G124300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 7511411-7513410 Brachypodium stacei
Brast01G124300 2.0kb downstream 2.0kb downstream 9626 true Chr01: 7513411-7523036 Brachypodium stacei
Brast01G124300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 7521037-7523036 Brachypodium stacei
Brast01G124300 5.0kb upstream 5.0kb upstream 12626 true Chr01: 7508411-7521036 Brachypodium stacei
Brast01G124300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 7508411-7513410 Brachypodium stacei
Brast01G124300 5.0kb downstream 5.0kb downstream 12626 true Chr01: 7513411-7526036 Brachypodium stacei
Brast01G124300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 7521037-7526036 Brachypodium stacei
Brast01G124300 10.0kb upstream 10.0kb upstream 17626 true Chr01: 7503411-7521036 Brachypodium stacei
Brast01G124300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 7503411-7513410 Brachypodium stacei
Brast01G124300 10.0kb downstream 10.0kb downstream 17626 true Chr01: 7513411-7531036 Brachypodium stacei
Brast01G124300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 7521037-7531036 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568835 5269 Grass View MSA
122045440 5273 Angiosperm View MSA
121350923 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain