Gene : Brast01G318600 B. stacei v1.1
Defline:  (1 of 1) PTHR12001//PTHR12001:SF54 - GERANYLGERANYL PYROPHOSPHATE SYNTHASE Genomic Order:  3186
Name:  ? Brast01G318600 Secondary Identifier:  ? PAC:32879714
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PWY-5120 Brachypodium stacei pathologic  
Bstacei PWY-5910 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast01G318600 0.5kb upstream 0.5kb upstream 2362 true Chr01: 23811962-23814323 Brachypodium stacei
Brast01G318600 0.5kb upstream 0.5kb upstream 500 false Chr01: 23813824-23814323 Brachypodium stacei
Brast01G318600 0.5kb downstream 0.5kb downstream 2362 true Chr01: 23811462-23813823 Brachypodium stacei
Brast01G318600 0.5kb downstream 0.5kb downstream 500 false Chr01: 23811462-23811961 Brachypodium stacei
Brast01G318600 1.0kb upstream 1.0kb upstream 2862 true Chr01: 23811962-23814823 Brachypodium stacei
Brast01G318600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 23813824-23814823 Brachypodium stacei
Brast01G318600 1.0kb downstream 1.0kb downstream 2862 true Chr01: 23810962-23813823 Brachypodium stacei
Brast01G318600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 23810962-23811961 Brachypodium stacei
Brast01G318600 2.0kb upstream 2.0kb upstream 3862 true Chr01: 23811962-23815823 Brachypodium stacei
Brast01G318600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 23813824-23815823 Brachypodium stacei
Brast01G318600 2.0kb downstream 2.0kb downstream 3862 true Chr01: 23809962-23813823 Brachypodium stacei
Brast01G318600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 23809962-23811961 Brachypodium stacei
Brast01G318600 5.0kb upstream 5.0kb upstream 6862 true Chr01: 23811962-23818823 Brachypodium stacei
Brast01G318600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 23813824-23818823 Brachypodium stacei
Brast01G318600 5.0kb downstream 5.0kb downstream 6862 true Chr01: 23806962-23813823 Brachypodium stacei
Brast01G318600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 23806962-23811961 Brachypodium stacei
Brast01G318600 10.0kb upstream 10.0kb upstream 11862 true Chr01: 23811962-23823823 Brachypodium stacei
Brast01G318600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 23813824-23823823 Brachypodium stacei
Brast01G318600 10.0kb downstream 10.0kb downstream 11862 true Chr01: 23801962-23813823 Brachypodium stacei
Brast01G318600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 23801962-23811961 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587937 5269 Grass View MSA
122051071 5273 Angiosperm View MSA
121348382 5274 Embryophyte View MSA
123424390 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain