Gene : Brast01G198000 B. stacei v1.1
Defline:  (1 of 3) 1.1.1.86 - Ketol-acid reductoisomerase (NADP(+)) / Dihydroxyisovalerate dehydrogenase (isomerizing) Genomic Order:  1980
Name:  ? Brast01G198000 Secondary Identifier:  ? PAC:32880894
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei BRANCHED-CHAIN-AA-SYN-PWY Brachypodium stacei pathologic  
Bstacei ILEUSYN-PWY Brachypodium stacei pathologic  
Bstacei PWY-3001 Brachypodium stacei pathologic  
Bstacei VALSYN-PWY Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast01G198000 0.5kb upstream 0.5kb upstream 4769 true Chr01: 12816517-12821285 Brachypodium stacei
Brast01G198000 0.5kb upstream 0.5kb upstream 500 false Chr01: 12820786-12821285 Brachypodium stacei
Brast01G198000 0.5kb downstream 0.5kb downstream 4769 true Chr01: 12816017-12820785 Brachypodium stacei
Brast01G198000 0.5kb downstream 0.5kb downstream 500 false Chr01: 12816017-12816516 Brachypodium stacei
Brast01G198000 1.0kb upstream 1.0kb upstream 5269 true Chr01: 12816517-12821785 Brachypodium stacei
Brast01G198000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 12820786-12821785 Brachypodium stacei
Brast01G198000 1.0kb downstream 1.0kb downstream 5269 true Chr01: 12815517-12820785 Brachypodium stacei
Brast01G198000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 12815517-12816516 Brachypodium stacei
Brast01G198000 2.0kb upstream 2.0kb upstream 6269 true Chr01: 12816517-12822785 Brachypodium stacei
Brast01G198000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 12820786-12822785 Brachypodium stacei
Brast01G198000 2.0kb downstream 2.0kb downstream 6269 true Chr01: 12814517-12820785 Brachypodium stacei
Brast01G198000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 12814517-12816516 Brachypodium stacei
Brast01G198000 5.0kb upstream 5.0kb upstream 9269 true Chr01: 12816517-12825785 Brachypodium stacei
Brast01G198000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 12820786-12825785 Brachypodium stacei
Brast01G198000 5.0kb downstream 5.0kb downstream 9269 true Chr01: 12811517-12820785 Brachypodium stacei
Brast01G198000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 12811517-12816516 Brachypodium stacei
Brast01G198000 10.0kb upstream 10.0kb upstream 14269 true Chr01: 12816517-12830785 Brachypodium stacei
Brast01G198000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 12820786-12830785 Brachypodium stacei
Brast01G198000 10.0kb downstream 10.0kb downstream 14269 true Chr01: 12806517-12820785 Brachypodium stacei
Brast01G198000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 12806517-12816516 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582762 5269 Grass View MSA
122043531 5273 Angiosperm View MSA
121344443 5274 Embryophyte View MSA
123428276 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain