Gene : Brast01G195600 B. stacei v1.1
Defline:  (1 of 22) KOG0417 - Ubiquitin-protein ligase Genomic Order:  1956
Name:  ? Brast01G195600 Secondary Identifier:  ? PAC:32878679
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PWY-7511 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast01G195600 0.5kb upstream 0.5kb upstream 8002 true Chr01: 12598762-12606763 Brachypodium stacei
Brast01G195600 0.5kb upstream 0.5kb upstream 500 false Chr01: 12598762-12599261 Brachypodium stacei
Brast01G195600 0.5kb downstream 0.5kb downstream 8002 true Chr01: 12599262-12607263 Brachypodium stacei
Brast01G195600 0.5kb downstream 0.5kb downstream 500 false Chr01: 12606764-12607263 Brachypodium stacei
Brast01G195600 1.0kb upstream 1.0kb upstream 8502 true Chr01: 12598262-12606763 Brachypodium stacei
Brast01G195600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 12598262-12599261 Brachypodium stacei
Brast01G195600 1.0kb downstream 1.0kb downstream 8502 true Chr01: 12599262-12607763 Brachypodium stacei
Brast01G195600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 12606764-12607763 Brachypodium stacei
Brast01G195600 2.0kb upstream 2.0kb upstream 9502 true Chr01: 12597262-12606763 Brachypodium stacei
Brast01G195600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 12597262-12599261 Brachypodium stacei
Brast01G195600 2.0kb downstream 2.0kb downstream 9502 true Chr01: 12599262-12608763 Brachypodium stacei
Brast01G195600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 12606764-12608763 Brachypodium stacei
Brast01G195600 5.0kb upstream 5.0kb upstream 12502 true Chr01: 12594262-12606763 Brachypodium stacei
Brast01G195600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 12594262-12599261 Brachypodium stacei
Brast01G195600 5.0kb downstream 5.0kb downstream 12502 true Chr01: 12599262-12611763 Brachypodium stacei
Brast01G195600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 12606764-12611763 Brachypodium stacei
Brast01G195600 10.0kb upstream 10.0kb upstream 17502 true Chr01: 12589262-12606763 Brachypodium stacei
Brast01G195600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 12589262-12599261 Brachypodium stacei
Brast01G195600 10.0kb downstream 10.0kb downstream 17502 true Chr01: 12599262-12616763 Brachypodium stacei
Brast01G195600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 12606764-12616763 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121993289 5273 Angiosperm View MSA
124576931 5269 Grass View MSA
121263582 5274 Embryophyte View MSA
123428086 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain