Gene : Brast02G118900 B. stacei v1.1
Defline:  (1 of 1) 4.2.3.5 - Chorismate synthase / 5-enolpyruvylshikimate-3-phosphate phospholyase Genomic Order:  1189
Name:  ? Brast02G118900 Secondary Identifier:  ? PAC:32875923
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei ARO-PWY Brachypodium stacei pathologic  
Bstacei PWY-6163 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast02G118900 0.5kb upstream 0.5kb upstream 4853 true Chr02: 7246331-7251183 Brachypodium stacei
Brast02G118900 0.5kb upstream 0.5kb upstream 500 false Chr02: 7250684-7251183 Brachypodium stacei
Brast02G118900 0.5kb downstream 0.5kb downstream 4853 true Chr02: 7245831-7250683 Brachypodium stacei
Brast02G118900 0.5kb downstream 0.5kb downstream 500 false Chr02: 7245831-7246330 Brachypodium stacei
Brast02G118900 1.0kb upstream 1.0kb upstream 5353 true Chr02: 7246331-7251683 Brachypodium stacei
Brast02G118900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 7250684-7251683 Brachypodium stacei
Brast02G118900 1.0kb downstream 1.0kb downstream 5353 true Chr02: 7245331-7250683 Brachypodium stacei
Brast02G118900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 7245331-7246330 Brachypodium stacei
Brast02G118900 2.0kb upstream 2.0kb upstream 6353 true Chr02: 7246331-7252683 Brachypodium stacei
Brast02G118900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 7250684-7252683 Brachypodium stacei
Brast02G118900 2.0kb downstream 2.0kb downstream 6353 true Chr02: 7244331-7250683 Brachypodium stacei
Brast02G118900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 7244331-7246330 Brachypodium stacei
Brast02G118900 5.0kb upstream 5.0kb upstream 9353 true Chr02: 7246331-7255683 Brachypodium stacei
Brast02G118900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 7250684-7255683 Brachypodium stacei
Brast02G118900 5.0kb downstream 5.0kb downstream 9353 true Chr02: 7241331-7250683 Brachypodium stacei
Brast02G118900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 7241331-7246330 Brachypodium stacei
Brast02G118900 10.0kb upstream 10.0kb upstream 14353 true Chr02: 7246331-7260683 Brachypodium stacei
Brast02G118900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 7250684-7260683 Brachypodium stacei
Brast02G118900 10.0kb downstream 10.0kb downstream 14353 true Chr02: 7236331-7250683 Brachypodium stacei
Brast02G118900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 7236331-7246330 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041230 5273 Angiosperm View MSA
124574152 5269 Grass View MSA
121346403 5274 Embryophyte View MSA
123428194 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain