Gene : Brast02G022600 B. stacei v1.1
Defline:  (1 of 2) 1.14.13.129 - Beta-carotene 3-hydroxylase / Beta-carotene 3,3'-monooxygenase Genomic Order:  226
Name:  ? Brast02G022600 Secondary Identifier:  ? PAC:32875676
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei CAROTENOID-PWY Brachypodium stacei pathologic  
Bstacei PWY-5944 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast02G022600 0.5kb upstream 0.5kb upstream 2805 true Chr02: 1186159-1188963 Brachypodium stacei
Brast02G022600 0.5kb upstream 0.5kb upstream 500 false Chr02: 1188464-1188963 Brachypodium stacei
Brast02G022600 0.5kb downstream 0.5kb downstream 2805 true Chr02: 1185659-1188463 Brachypodium stacei
Brast02G022600 0.5kb downstream 0.5kb downstream 500 false Chr02: 1185659-1186158 Brachypodium stacei
Brast02G022600 1.0kb upstream 1.0kb upstream 3305 true Chr02: 1186159-1189463 Brachypodium stacei
Brast02G022600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 1188464-1189463 Brachypodium stacei
Brast02G022600 1.0kb downstream 1.0kb downstream 3305 true Chr02: 1185159-1188463 Brachypodium stacei
Brast02G022600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 1185159-1186158 Brachypodium stacei
Brast02G022600 2.0kb upstream 2.0kb upstream 4305 true Chr02: 1186159-1190463 Brachypodium stacei
Brast02G022600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 1188464-1190463 Brachypodium stacei
Brast02G022600 2.0kb downstream 2.0kb downstream 4305 true Chr02: 1184159-1188463 Brachypodium stacei
Brast02G022600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 1184159-1186158 Brachypodium stacei
Brast02G022600 5.0kb upstream 5.0kb upstream 7305 true Chr02: 1186159-1193463 Brachypodium stacei
Brast02G022600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 1188464-1193463 Brachypodium stacei
Brast02G022600 5.0kb downstream 5.0kb downstream 7305 true Chr02: 1181159-1188463 Brachypodium stacei
Brast02G022600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 1181159-1186158 Brachypodium stacei
Brast02G022600 10.0kb upstream 10.0kb upstream 12305 true Chr02: 1186159-1198463 Brachypodium stacei
Brast02G022600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 1188464-1198463 Brachypodium stacei
Brast02G022600 10.0kb downstream 10.0kb downstream 12305 true Chr02: 1176159-1188463 Brachypodium stacei
Brast02G022600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 1176159-1186158 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586516 5269 Grass View MSA
122046641 5273 Angiosperm View MSA
123429104 5275 Viridiplantae View MSA
121351007 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain