Gene : Brast03G138900 B. stacei v1.1
Defline:  (1 of 1) PTHR20852:SF16 - TYPE-1 GLUTAMINE SYNTHETASE 1 Genomic Order:  1389
Name:  ? Brast03G138900 Secondary Identifier:  ? PAC:32857197
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei GLNSYN-PWY Brachypodium stacei pathologic  
Bstacei PWY-3282 Brachypodium stacei pathologic  
Bstacei PWY-381 Brachypodium stacei pathologic  
Bstacei PWY-6549 Brachypodium stacei pathologic  
Bstacei PWY-6963 Brachypodium stacei pathologic  
Bstacei PWY-6964 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast03G138900 0.5kb upstream 0.5kb upstream 8495 true Chr03: 13362010-13370504 Brachypodium stacei
Brast03G138900 0.5kb upstream 0.5kb upstream 500 false Chr03: 13362010-13362509 Brachypodium stacei
Brast03G138900 0.5kb downstream 0.5kb downstream 8495 true Chr03: 13362510-13371004 Brachypodium stacei
Brast03G138900 0.5kb downstream 0.5kb downstream 500 false Chr03: 13370505-13371004 Brachypodium stacei
Brast03G138900 1.0kb upstream 1.0kb upstream 8995 true Chr03: 13361510-13370504 Brachypodium stacei
Brast03G138900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 13361510-13362509 Brachypodium stacei
Brast03G138900 1.0kb downstream 1.0kb downstream 8995 true Chr03: 13362510-13371504 Brachypodium stacei
Brast03G138900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 13370505-13371504 Brachypodium stacei
Brast03G138900 2.0kb upstream 2.0kb upstream 9995 true Chr03: 13360510-13370504 Brachypodium stacei
Brast03G138900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 13360510-13362509 Brachypodium stacei
Brast03G138900 2.0kb downstream 2.0kb downstream 9995 true Chr03: 13362510-13372504 Brachypodium stacei
Brast03G138900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 13370505-13372504 Brachypodium stacei
Brast03G138900 5.0kb upstream 5.0kb upstream 12995 true Chr03: 13357510-13370504 Brachypodium stacei
Brast03G138900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 13357510-13362509 Brachypodium stacei
Brast03G138900 5.0kb downstream 5.0kb downstream 12995 true Chr03: 13362510-13375504 Brachypodium stacei
Brast03G138900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 13370505-13375504 Brachypodium stacei
Brast03G138900 10.0kb upstream 10.0kb upstream 17995 true Chr03: 13352510-13370504 Brachypodium stacei
Brast03G138900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 13352510-13362509 Brachypodium stacei
Brast03G138900 10.0kb downstream 10.0kb downstream 17995 true Chr03: 13362510-13380504 Brachypodium stacei
Brast03G138900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 13370505-13380504 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569245 5269 Grass View MSA
122046045 5273 Angiosperm View MSA
121348529 5274 Embryophyte View MSA
123428524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain