Gene : Brast03G212000 B. stacei v1.1
Defline:  (1 of 1) PTHR10739//PTHR10739:SF30 - CYTIDYLYLTRANSFERASE Genomic Order:  2120
Name:  ? Brast03G212000 Secondary Identifier:  ? PAC:32857658
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PWY-3561 Brachypodium stacei pathologic  
Bstacei PWY3O-450 Brachypodium stacei pathologic  
Bstacei PWY4FS-2 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast03G212000 0.5kb upstream 0.5kb upstream 2898 true Chr03: 19026378-19029275 Brachypodium stacei
Brast03G212000 0.5kb upstream 0.5kb upstream 500 false Chr03: 19028776-19029275 Brachypodium stacei
Brast03G212000 0.5kb downstream 0.5kb downstream 2898 true Chr03: 19025878-19028775 Brachypodium stacei
Brast03G212000 0.5kb downstream 0.5kb downstream 500 false Chr03: 19025878-19026377 Brachypodium stacei
Brast03G212000 1.0kb upstream 1.0kb upstream 3398 true Chr03: 19026378-19029775 Brachypodium stacei
Brast03G212000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 19028776-19029775 Brachypodium stacei
Brast03G212000 1.0kb downstream 1.0kb downstream 3398 true Chr03: 19025378-19028775 Brachypodium stacei
Brast03G212000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 19025378-19026377 Brachypodium stacei
Brast03G212000 2.0kb upstream 2.0kb upstream 4398 true Chr03: 19026378-19030775 Brachypodium stacei
Brast03G212000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 19028776-19030775 Brachypodium stacei
Brast03G212000 2.0kb downstream 2.0kb downstream 4398 true Chr03: 19024378-19028775 Brachypodium stacei
Brast03G212000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 19024378-19026377 Brachypodium stacei
Brast03G212000 5.0kb upstream 5.0kb upstream 7398 true Chr03: 19026378-19033775 Brachypodium stacei
Brast03G212000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 19028776-19033775 Brachypodium stacei
Brast03G212000 5.0kb downstream 5.0kb downstream 7398 true Chr03: 19021378-19028775 Brachypodium stacei
Brast03G212000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 19021378-19026377 Brachypodium stacei
Brast03G212000 10.0kb upstream 10.0kb upstream 12398 true Chr03: 19026378-19038775 Brachypodium stacei
Brast03G212000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 19028776-19038775 Brachypodium stacei
Brast03G212000 10.0kb downstream 10.0kb downstream 12398 true Chr03: 19016378-19028775 Brachypodium stacei
Brast03G212000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 19016378-19026377 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582845 5269 Grass View MSA
122047197 5273 Angiosperm View MSA
121348751 5274 Embryophyte View MSA
123428717 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain