Gene : Brast03G013100 B. stacei v1.1
Defline:  (1 of 1) PTHR12358//PTHR12358:SF37 - SPHINGOSINE KINASE Genomic Order:  131
Name:  ? Brast03G013100 Secondary Identifier:  ? PAC:32858805
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PWY-5129 Brachypodium stacei pathologic  
Bstacei PWY-6483 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast03G013100 0.5kb upstream 0.5kb upstream 4381 true Chr03: 711633-716013 Brachypodium stacei
Brast03G013100 0.5kb upstream 0.5kb upstream 500 false Chr03: 711633-712132 Brachypodium stacei
Brast03G013100 0.5kb downstream 0.5kb downstream 4381 true Chr03: 712133-716513 Brachypodium stacei
Brast03G013100 0.5kb downstream 0.5kb downstream 500 false Chr03: 716014-716513 Brachypodium stacei
Brast03G013100 1.0kb upstream 1.0kb upstream 4881 true Chr03: 711133-716013 Brachypodium stacei
Brast03G013100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 711133-712132 Brachypodium stacei
Brast03G013100 1.0kb downstream 1.0kb downstream 4881 true Chr03: 712133-717013 Brachypodium stacei
Brast03G013100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 716014-717013 Brachypodium stacei
Brast03G013100 2.0kb upstream 2.0kb upstream 5881 true Chr03: 710133-716013 Brachypodium stacei
Brast03G013100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 710133-712132 Brachypodium stacei
Brast03G013100 2.0kb downstream 2.0kb downstream 5881 true Chr03: 712133-718013 Brachypodium stacei
Brast03G013100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 716014-718013 Brachypodium stacei
Brast03G013100 5.0kb upstream 5.0kb upstream 8881 true Chr03: 707133-716013 Brachypodium stacei
Brast03G013100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 707133-712132 Brachypodium stacei
Brast03G013100 5.0kb downstream 5.0kb downstream 8881 true Chr03: 712133-721013 Brachypodium stacei
Brast03G013100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 716014-721013 Brachypodium stacei
Brast03G013100 10.0kb upstream 10.0kb upstream 13881 true Chr03: 702133-716013 Brachypodium stacei
Brast03G013100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 702133-712132 Brachypodium stacei
Brast03G013100 10.0kb downstream 10.0kb downstream 13881 true Chr03: 712133-726013 Brachypodium stacei
Brast03G013100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 716014-726013 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583970 5269 Grass View MSA
122046814 5273 Angiosperm View MSA
121349004 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain