Gene : Brast03G129700 B. stacei v1.1
Defline:  (1 of 1) PTHR23418:SF4 - 1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4 Genomic Order:  1297
Name:  ? Brast03G129700 Secondary Identifier:  ? PAC:32856151
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PWY-4361 Brachypodium stacei pathologic  
Bstacei PWY-5389 Brachypodium stacei pathologic  
Bstacei PWY-7270 Brachypodium stacei pathologic  
Bstacei PWY-7528 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast03G129700 0.5kb upstream 0.5kb upstream 4657 true Chr03: 12499709-12504365 Brachypodium stacei
Brast03G129700 0.5kb upstream 0.5kb upstream 500 false Chr03: 12503866-12504365 Brachypodium stacei
Brast03G129700 0.5kb downstream 0.5kb downstream 4657 true Chr03: 12499209-12503865 Brachypodium stacei
Brast03G129700 0.5kb downstream 0.5kb downstream 500 false Chr03: 12499209-12499708 Brachypodium stacei
Brast03G129700 1.0kb upstream 1.0kb upstream 5157 true Chr03: 12499709-12504865 Brachypodium stacei
Brast03G129700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 12503866-12504865 Brachypodium stacei
Brast03G129700 1.0kb downstream 1.0kb downstream 5157 true Chr03: 12498709-12503865 Brachypodium stacei
Brast03G129700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 12498709-12499708 Brachypodium stacei
Brast03G129700 2.0kb upstream 2.0kb upstream 6157 true Chr03: 12499709-12505865 Brachypodium stacei
Brast03G129700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 12503866-12505865 Brachypodium stacei
Brast03G129700 2.0kb downstream 2.0kb downstream 6157 true Chr03: 12497709-12503865 Brachypodium stacei
Brast03G129700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 12497709-12499708 Brachypodium stacei
Brast03G129700 5.0kb upstream 5.0kb upstream 9157 true Chr03: 12499709-12508865 Brachypodium stacei
Brast03G129700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 12503866-12508865 Brachypodium stacei
Brast03G129700 5.0kb downstream 5.0kb downstream 9157 true Chr03: 12494709-12503865 Brachypodium stacei
Brast03G129700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 12494709-12499708 Brachypodium stacei
Brast03G129700 10.0kb upstream 10.0kb upstream 14157 true Chr03: 12499709-12513865 Brachypodium stacei
Brast03G129700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 12503866-12513865 Brachypodium stacei
Brast03G129700 10.0kb downstream 10.0kb downstream 14157 true Chr03: 12489709-12503865 Brachypodium stacei
Brast03G129700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 12489709-12499708 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572378 5269 Grass View MSA
122046510 5273 Angiosperm View MSA
121343851 5274 Embryophyte View MSA
123424670 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain