Gene : Brast03G132200 B. stacei v1.1

Defline:  (1 of 3) PTHR10126 - TATA-BOX BINDING PROTEIN Genomic Order:  1322
Name:  ? Brast03G132200 Secondary Identifier:  ? PAC:32859307

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast03G132200 0.5kb upstream 0.5kb upstream 3132 true Chr03: 12752468-12755599 Brachypodium stacei
Brast03G132200 0.5kb upstream 0.5kb upstream 500 false Chr03: 12755100-12755599 Brachypodium stacei
Brast03G132200 0.5kb downstream 0.5kb downstream 3132 true Chr03: 12751968-12755099 Brachypodium stacei
Brast03G132200 0.5kb downstream 0.5kb downstream 500 false Chr03: 12751968-12752467 Brachypodium stacei
Brast03G132200 1.0kb upstream 1.0kb upstream 3632 true Chr03: 12752468-12756099 Brachypodium stacei
Brast03G132200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 12755100-12756099 Brachypodium stacei
Brast03G132200 1.0kb downstream 1.0kb downstream 3632 true Chr03: 12751468-12755099 Brachypodium stacei
Brast03G132200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 12751468-12752467 Brachypodium stacei
Brast03G132200 2.0kb upstream 2.0kb upstream 4632 true Chr03: 12752468-12757099 Brachypodium stacei
Brast03G132200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 12755100-12757099 Brachypodium stacei
Brast03G132200 2.0kb downstream 2.0kb downstream 4632 true Chr03: 12750468-12755099 Brachypodium stacei
Brast03G132200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 12750468-12752467 Brachypodium stacei
Brast03G132200 5.0kb upstream 5.0kb upstream 7632 true Chr03: 12752468-12760099 Brachypodium stacei
Brast03G132200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 12755100-12760099 Brachypodium stacei
Brast03G132200 5.0kb downstream 5.0kb downstream 7632 true Chr03: 12747468-12755099 Brachypodium stacei
Brast03G132200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 12747468-12752467 Brachypodium stacei
Brast03G132200 10.0kb upstream 10.0kb upstream 12632 true Chr03: 12752468-12765099 Brachypodium stacei
Brast03G132200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 12755100-12765099 Brachypodium stacei
Brast03G132200 10.0kb downstream 10.0kb downstream 12632 true Chr03: 12742468-12755099 Brachypodium stacei
Brast03G132200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 12742468-12752467 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994185 5273 Angiosperm View MSA
124583251 5269 Grass View MSA
123429185 5275 Viridiplantae View MSA
121264423 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain