Gene : Brast04G221000 B. stacei v1.1
Defline:  (1 of 2) PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED Genomic Order:  2210
Name:  ? Brast04G221000 Secondary Identifier:  ? PAC:32866198
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PWY-7511 Brachypodium stacei pathologic  

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast04G221000 0.5kb upstream 0.5kb upstream 6613 true Chr04: 16272367-16278979 Brachypodium stacei
Brast04G221000 0.5kb upstream 0.5kb upstream 500 false Chr04: 16278480-16278979 Brachypodium stacei
Brast04G221000 0.5kb downstream 0.5kb downstream 6613 true Chr04: 16271867-16278479 Brachypodium stacei
Brast04G221000 0.5kb downstream 0.5kb downstream 500 false Chr04: 16271867-16272366 Brachypodium stacei
Brast04G221000 1.0kb upstream 1.0kb upstream 7113 true Chr04: 16272367-16279479 Brachypodium stacei
Brast04G221000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 16278480-16279479 Brachypodium stacei
Brast04G221000 1.0kb downstream 1.0kb downstream 7113 true Chr04: 16271367-16278479 Brachypodium stacei
Brast04G221000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 16271367-16272366 Brachypodium stacei
Brast04G221000 2.0kb upstream 2.0kb upstream 8113 true Chr04: 16272367-16280479 Brachypodium stacei
Brast04G221000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 16278480-16280479 Brachypodium stacei
Brast04G221000 2.0kb downstream 2.0kb downstream 8113 true Chr04: 16270367-16278479 Brachypodium stacei
Brast04G221000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 16270367-16272366 Brachypodium stacei
Brast04G221000 5.0kb upstream 5.0kb upstream 11113 true Chr04: 16272367-16283479 Brachypodium stacei
Brast04G221000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 16278480-16283479 Brachypodium stacei
Brast04G221000 5.0kb downstream 5.0kb downstream 11113 true Chr04: 16267367-16278479 Brachypodium stacei
Brast04G221000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 16267367-16272366 Brachypodium stacei
Brast04G221000 10.0kb upstream 10.0kb upstream 16113 true Chr04: 16272367-16288479 Brachypodium stacei
Brast04G221000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 16278480-16288479 Brachypodium stacei
Brast04G221000 10.0kb downstream 10.0kb downstream 16113 true Chr04: 16262367-16278479 Brachypodium stacei
Brast04G221000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 16262367-16272366 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586417 5269 Grass View MSA
122050638 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain