Gene : Brast04G093400 B. stacei v1.1
Defline:  (1 of 1) PTHR10108:SF708 - TOCOPHEROL O-METHYLTRANSFERASE, CHLOROPLASTIC Genomic Order:  934
Name:  ? Brast04G093400 Secondary Identifier:  ? PAC:32863577
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PWY-1422 Brachypodium stacei pathologic  
Bstacei PWY-7436 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast04G093400 0.5kb upstream 0.5kb upstream 4035 true Chr04: 5745482-5749516 Brachypodium stacei
Brast04G093400 0.5kb upstream 0.5kb upstream 500 false Chr04: 5749017-5749516 Brachypodium stacei
Brast04G093400 0.5kb downstream 0.5kb downstream 4035 true Chr04: 5744982-5749016 Brachypodium stacei
Brast04G093400 0.5kb downstream 0.5kb downstream 500 false Chr04: 5744982-5745481 Brachypodium stacei
Brast04G093400 1.0kb upstream 1.0kb upstream 4535 true Chr04: 5745482-5750016 Brachypodium stacei
Brast04G093400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 5749017-5750016 Brachypodium stacei
Brast04G093400 1.0kb downstream 1.0kb downstream 4535 true Chr04: 5744482-5749016 Brachypodium stacei
Brast04G093400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 5744482-5745481 Brachypodium stacei
Brast04G093400 2.0kb upstream 2.0kb upstream 5535 true Chr04: 5745482-5751016 Brachypodium stacei
Brast04G093400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 5749017-5751016 Brachypodium stacei
Brast04G093400 2.0kb downstream 2.0kb downstream 5535 true Chr04: 5743482-5749016 Brachypodium stacei
Brast04G093400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 5743482-5745481 Brachypodium stacei
Brast04G093400 5.0kb upstream 5.0kb upstream 8535 true Chr04: 5745482-5754016 Brachypodium stacei
Brast04G093400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 5749017-5754016 Brachypodium stacei
Brast04G093400 5.0kb downstream 5.0kb downstream 8535 true Chr04: 5740482-5749016 Brachypodium stacei
Brast04G093400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 5740482-5745481 Brachypodium stacei
Brast04G093400 10.0kb upstream 10.0kb upstream 13535 true Chr04: 5745482-5759016 Brachypodium stacei
Brast04G093400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 5749017-5759016 Brachypodium stacei
Brast04G093400 10.0kb downstream 10.0kb downstream 13535 true Chr04: 5735482-5749016 Brachypodium stacei
Brast04G093400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 5735482-5745481 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569440 5269 Grass View MSA
122044817 5273 Angiosperm View MSA
121347406 5274 Embryophyte View MSA
123427925 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain