Gene : Brast04G269400 B. stacei v1.1
Defline:  (1 of 1) PTHR13789:SF249 - LYCOPENE BETA CYCLASE, CHLOROPLASTIC Genomic Order:  2694
Name:  ? Brast04G269400 Secondary Identifier:  ? PAC:32862752
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei CAROTENOID-PWY Brachypodium stacei pathologic  
Bstacei PWY-5943 Brachypodium stacei pathologic  
Bstacei PWY-5947 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast04G269400 0.5kb upstream 0.5kb upstream 1967 true Chr04: 20153127-20155093 Brachypodium stacei
Brast04G269400 0.5kb upstream 0.5kb upstream 500 false Chr04: 20153127-20153626 Brachypodium stacei
Brast04G269400 0.5kb downstream 0.5kb downstream 1967 true Chr04: 20153627-20155593 Brachypodium stacei
Brast04G269400 0.5kb downstream 0.5kb downstream 500 false Chr04: 20155094-20155593 Brachypodium stacei
Brast04G269400 1.0kb upstream 1.0kb upstream 2467 true Chr04: 20152627-20155093 Brachypodium stacei
Brast04G269400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 20152627-20153626 Brachypodium stacei
Brast04G269400 1.0kb downstream 1.0kb downstream 2467 true Chr04: 20153627-20156093 Brachypodium stacei
Brast04G269400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 20155094-20156093 Brachypodium stacei
Brast04G269400 2.0kb upstream 2.0kb upstream 3467 true Chr04: 20151627-20155093 Brachypodium stacei
Brast04G269400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 20151627-20153626 Brachypodium stacei
Brast04G269400 2.0kb downstream 2.0kb downstream 3467 true Chr04: 20153627-20157093 Brachypodium stacei
Brast04G269400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 20155094-20157093 Brachypodium stacei
Brast04G269400 5.0kb upstream 5.0kb upstream 6467 true Chr04: 20148627-20155093 Brachypodium stacei
Brast04G269400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 20148627-20153626 Brachypodium stacei
Brast04G269400 5.0kb downstream 5.0kb downstream 6467 true Chr04: 20153627-20160093 Brachypodium stacei
Brast04G269400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 20155094-20160093 Brachypodium stacei
Brast04G269400 10.0kb upstream 10.0kb upstream 11467 true Chr04: 20143627-20155093 Brachypodium stacei
Brast04G269400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 20143627-20153626 Brachypodium stacei
Brast04G269400 10.0kb downstream 10.0kb downstream 11467 true Chr04: 20153627-20165093 Brachypodium stacei
Brast04G269400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 20155094-20165093 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579476 5269 Grass View MSA
122046204 5273 Angiosperm View MSA
121345644 5274 Embryophyte View MSA
123423874 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain