Gene : Brast04G171300 B. stacei v1.1
Defline:  (1 of 1) PTHR13370 - RNA METHYLASE-RELATED Genomic Order:  1713
Name:  ? Brast04G171300 Secondary Identifier:  ? PAC:32864310
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PWY-6829 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast04G171300 0.5kb upstream 0.5kb upstream 3607 true Chr04: 11224400-11228006 Brachypodium stacei
Brast04G171300 0.5kb upstream 0.5kb upstream 500 false Chr04: 11224400-11224899 Brachypodium stacei
Brast04G171300 0.5kb downstream 0.5kb downstream 3607 true Chr04: 11224900-11228506 Brachypodium stacei
Brast04G171300 0.5kb downstream 0.5kb downstream 500 false Chr04: 11228007-11228506 Brachypodium stacei
Brast04G171300 1.0kb upstream 1.0kb upstream 4107 true Chr04: 11223900-11228006 Brachypodium stacei
Brast04G171300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 11223900-11224899 Brachypodium stacei
Brast04G171300 1.0kb downstream 1.0kb downstream 4107 true Chr04: 11224900-11229006 Brachypodium stacei
Brast04G171300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 11228007-11229006 Brachypodium stacei
Brast04G171300 2.0kb upstream 2.0kb upstream 5107 true Chr04: 11222900-11228006 Brachypodium stacei
Brast04G171300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 11222900-11224899 Brachypodium stacei
Brast04G171300 2.0kb downstream 2.0kb downstream 5107 true Chr04: 11224900-11230006 Brachypodium stacei
Brast04G171300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 11228007-11230006 Brachypodium stacei
Brast04G171300 5.0kb upstream 5.0kb upstream 8107 true Chr04: 11219900-11228006 Brachypodium stacei
Brast04G171300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 11219900-11224899 Brachypodium stacei
Brast04G171300 5.0kb downstream 5.0kb downstream 8107 true Chr04: 11224900-11233006 Brachypodium stacei
Brast04G171300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 11228007-11233006 Brachypodium stacei
Brast04G171300 10.0kb upstream 10.0kb upstream 13107 true Chr04: 11214900-11228006 Brachypodium stacei
Brast04G171300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 11214900-11224899 Brachypodium stacei
Brast04G171300 10.0kb downstream 10.0kb downstream 13107 true Chr04: 11224900-11238006 Brachypodium stacei
Brast04G171300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 11228007-11238006 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573594 5269 Grass View MSA
122048014 5273 Angiosperm View MSA
121347099 5274 Embryophyte View MSA
123424311 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain