Gene : Brast05G209700 B. stacei v1.1
Defline:  (1 of 4) 2.5.1.32 - 15-cis-phytoene synthase / PSase Genomic Order:  2097
Name:  ? Brast05G209700 Secondary Identifier:  ? PAC:32870230
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei CAROTENOID-PWY Brachypodium stacei pathologic  
Bstacei PWY-6475 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast05G209700 0.5kb upstream 0.5kb upstream 3382 true Chr05: 17783948-17787329 Brachypodium stacei
Brast05G209700 0.5kb upstream 0.5kb upstream 500 false Chr05: 17786830-17787329 Brachypodium stacei
Brast05G209700 0.5kb downstream 0.5kb downstream 3382 true Chr05: 17783448-17786829 Brachypodium stacei
Brast05G209700 0.5kb downstream 0.5kb downstream 500 false Chr05: 17783448-17783947 Brachypodium stacei
Brast05G209700 1.0kb upstream 1.0kb upstream 3882 true Chr05: 17783948-17787829 Brachypodium stacei
Brast05G209700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 17786830-17787829 Brachypodium stacei
Brast05G209700 1.0kb downstream 1.0kb downstream 3882 true Chr05: 17782948-17786829 Brachypodium stacei
Brast05G209700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 17782948-17783947 Brachypodium stacei
Brast05G209700 2.0kb upstream 2.0kb upstream 4882 true Chr05: 17783948-17788829 Brachypodium stacei
Brast05G209700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 17786830-17788829 Brachypodium stacei
Brast05G209700 2.0kb downstream 2.0kb downstream 4882 true Chr05: 17781948-17786829 Brachypodium stacei
Brast05G209700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 17781948-17783947 Brachypodium stacei
Brast05G209700 5.0kb upstream 5.0kb upstream 7882 true Chr05: 17783948-17791829 Brachypodium stacei
Brast05G209700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 17786830-17791829 Brachypodium stacei
Brast05G209700 5.0kb downstream 5.0kb downstream 7882 true Chr05: 17778948-17786829 Brachypodium stacei
Brast05G209700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 17778948-17783947 Brachypodium stacei
Brast05G209700 10.0kb upstream 10.0kb upstream 12882 true Chr05: 17783948-17796829 Brachypodium stacei
Brast05G209700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 17786830-17796829 Brachypodium stacei
Brast05G209700 10.0kb downstream 10.0kb downstream 12882 true Chr05: 17773948-17786829 Brachypodium stacei
Brast05G209700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 17773948-17783947 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121993341 5273 Angiosperm View MSA
124577513 5269 Grass View MSA
121263628 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain