Gene : Brast05G200200 B. stacei v1.1
Defline:  (1 of 3) 4.1.1.17 - Ornithine decarboxylase / L-ornithine carboxy-lyase Genomic Order:  2002
Name:  ? Brast05G200200 Secondary Identifier:  ? PAC:32869162
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei POLYAMINSYN3-PWY Brachypodium stacei pathologic  
Bstacei PWY-46 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast05G200200 0.5kb upstream 0.5kb upstream 2047 true Chr05: 17270511-17272557 Brachypodium stacei
Brast05G200200 0.5kb upstream 0.5kb upstream 500 false Chr05: 17272058-17272557 Brachypodium stacei
Brast05G200200 0.5kb downstream 0.5kb downstream 2047 true Chr05: 17270011-17272057 Brachypodium stacei
Brast05G200200 0.5kb downstream 0.5kb downstream 500 false Chr05: 17270011-17270510 Brachypodium stacei
Brast05G200200 1.0kb upstream 1.0kb upstream 2547 true Chr05: 17270511-17273057 Brachypodium stacei
Brast05G200200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 17272058-17273057 Brachypodium stacei
Brast05G200200 1.0kb downstream 1.0kb downstream 2547 true Chr05: 17269511-17272057 Brachypodium stacei
Brast05G200200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 17269511-17270510 Brachypodium stacei
Brast05G200200 2.0kb upstream 2.0kb upstream 3547 true Chr05: 17270511-17274057 Brachypodium stacei
Brast05G200200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 17272058-17274057 Brachypodium stacei
Brast05G200200 2.0kb downstream 2.0kb downstream 3547 true Chr05: 17268511-17272057 Brachypodium stacei
Brast05G200200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 17268511-17270510 Brachypodium stacei
Brast05G200200 5.0kb upstream 5.0kb upstream 6547 true Chr05: 17270511-17277057 Brachypodium stacei
Brast05G200200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 17272058-17277057 Brachypodium stacei
Brast05G200200 5.0kb downstream 5.0kb downstream 6547 true Chr05: 17265511-17272057 Brachypodium stacei
Brast05G200200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 17265511-17270510 Brachypodium stacei
Brast05G200200 10.0kb upstream 10.0kb upstream 11547 true Chr05: 17270511-17282057 Brachypodium stacei
Brast05G200200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 17272058-17282057 Brachypodium stacei
Brast05G200200 10.0kb downstream 10.0kb downstream 11547 true Chr05: 17260511-17272057 Brachypodium stacei
Brast05G200200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 17260511-17270510 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578154 5269 Grass View MSA
122048449 5273 Angiosperm View MSA
121349416 5274 Embryophyte View MSA
123428095 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain