Gene : Brast06G198100 B. stacei v1.1
Defline:  (1 of 1) PTHR11586:SF18 - NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN Genomic Order:  1981
Name:  ? Brast06G198100 Secondary Identifier:  ? PAC:32851341
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei TRNA-CHARGING-PWY Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast06G198100 0.5kb upstream 0.5kb upstream 6923 true Chr06: 18195638-18202560 Brachypodium stacei
Brast06G198100 0.5kb upstream 0.5kb upstream 500 false Chr06: 18202061-18202560 Brachypodium stacei
Brast06G198100 0.5kb downstream 0.5kb downstream 6923 true Chr06: 18195138-18202060 Brachypodium stacei
Brast06G198100 0.5kb downstream 0.5kb downstream 500 false Chr06: 18195138-18195637 Brachypodium stacei
Brast06G198100 1.0kb upstream 1.0kb upstream 7423 true Chr06: 18195638-18203060 Brachypodium stacei
Brast06G198100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 18202061-18203060 Brachypodium stacei
Brast06G198100 1.0kb downstream 1.0kb downstream 7423 true Chr06: 18194638-18202060 Brachypodium stacei
Brast06G198100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 18194638-18195637 Brachypodium stacei
Brast06G198100 2.0kb upstream 2.0kb upstream 8423 true Chr06: 18195638-18204060 Brachypodium stacei
Brast06G198100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 18202061-18204060 Brachypodium stacei
Brast06G198100 2.0kb downstream 2.0kb downstream 8423 true Chr06: 18193638-18202060 Brachypodium stacei
Brast06G198100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 18193638-18195637 Brachypodium stacei
Brast06G198100 5.0kb upstream 5.0kb upstream 11423 true Chr06: 18195638-18207060 Brachypodium stacei
Brast06G198100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 18202061-18207060 Brachypodium stacei
Brast06G198100 5.0kb downstream 5.0kb downstream 11423 true Chr06: 18190638-18202060 Brachypodium stacei
Brast06G198100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 18190638-18195637 Brachypodium stacei
Brast06G198100 10.0kb upstream 10.0kb upstream 16423 true Chr06: 18195638-18212060 Brachypodium stacei
Brast06G198100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 18202061-18212060 Brachypodium stacei
Brast06G198100 10.0kb downstream 10.0kb downstream 16423 true Chr06: 18185638-18202060 Brachypodium stacei
Brast06G198100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 18185638-18195637 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568725 5269 Grass View MSA
122045155 5273 Angiosperm View MSA
121346605 5274 Embryophyte View MSA
123427531 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain