Gene : Brast06G194500 B. stacei v1.1
Defline:  (1 of 2) 2.2.1.7 - 1-deoxy-D-xylulose-5-phosphate synthase / DXP-synthase Genomic Order:  1945
Name:  ? Brast06G194500 Secondary Identifier:  ? PAC:32849948
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PWY-7560 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast06G194500 0.5kb upstream 0.5kb upstream 3533 true Chr06: 17903247-17906779 Brachypodium stacei
Brast06G194500 0.5kb upstream 0.5kb upstream 500 false Chr06: 17903247-17903746 Brachypodium stacei
Brast06G194500 0.5kb downstream 0.5kb downstream 3533 true Chr06: 17903747-17907279 Brachypodium stacei
Brast06G194500 0.5kb downstream 0.5kb downstream 500 false Chr06: 17906780-17907279 Brachypodium stacei
Brast06G194500 1.0kb upstream 1.0kb upstream 4033 true Chr06: 17902747-17906779 Brachypodium stacei
Brast06G194500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 17902747-17903746 Brachypodium stacei
Brast06G194500 1.0kb downstream 1.0kb downstream 4033 true Chr06: 17903747-17907779 Brachypodium stacei
Brast06G194500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 17906780-17907779 Brachypodium stacei
Brast06G194500 2.0kb upstream 2.0kb upstream 5033 true Chr06: 17901747-17906779 Brachypodium stacei
Brast06G194500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 17901747-17903746 Brachypodium stacei
Brast06G194500 2.0kb downstream 2.0kb downstream 5033 true Chr06: 17903747-17908779 Brachypodium stacei
Brast06G194500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 17906780-17908779 Brachypodium stacei
Brast06G194500 5.0kb upstream 5.0kb upstream 8033 true Chr06: 17898747-17906779 Brachypodium stacei
Brast06G194500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 17898747-17903746 Brachypodium stacei
Brast06G194500 5.0kb downstream 5.0kb downstream 8033 true Chr06: 17903747-17911779 Brachypodium stacei
Brast06G194500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 17906780-17911779 Brachypodium stacei
Brast06G194500 10.0kb upstream 10.0kb upstream 13033 true Chr06: 17893747-17906779 Brachypodium stacei
Brast06G194500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 17893747-17903746 Brachypodium stacei
Brast06G194500 10.0kb downstream 10.0kb downstream 13033 true Chr06: 17903747-17916779 Brachypodium stacei
Brast06G194500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 17906780-17916779 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583726 5269 Grass View MSA
122048955 5273 Angiosperm View MSA
121351194 5274 Embryophyte View MSA
123428527 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain