Gene : Brast06G092300 B. stacei v1.1
Defline:  (1 of 2) PTHR12358//PTHR12358:SF42 - SPHINGOSINE KINASE Genomic Order:  923
Name:  ? Brast06G092300 Secondary Identifier:  ? PAC:32850370
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PWY-5129 Brachypodium stacei pathologic  
Bstacei PWY-6483 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast06G092300 0.5kb upstream 0.5kb upstream 4485 true Chr06: 5737845-5742329 Brachypodium stacei
Brast06G092300 0.5kb upstream 0.5kb upstream 500 false Chr06: 5741830-5742329 Brachypodium stacei
Brast06G092300 0.5kb downstream 0.5kb downstream 4485 true Chr06: 5737345-5741829 Brachypodium stacei
Brast06G092300 0.5kb downstream 0.5kb downstream 500 false Chr06: 5737345-5737844 Brachypodium stacei
Brast06G092300 1.0kb upstream 1.0kb upstream 4985 true Chr06: 5737845-5742829 Brachypodium stacei
Brast06G092300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 5741830-5742829 Brachypodium stacei
Brast06G092300 1.0kb downstream 1.0kb downstream 4985 true Chr06: 5736845-5741829 Brachypodium stacei
Brast06G092300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 5736845-5737844 Brachypodium stacei
Brast06G092300 2.0kb upstream 2.0kb upstream 5985 true Chr06: 5737845-5743829 Brachypodium stacei
Brast06G092300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 5741830-5743829 Brachypodium stacei
Brast06G092300 2.0kb downstream 2.0kb downstream 5985 true Chr06: 5735845-5741829 Brachypodium stacei
Brast06G092300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 5735845-5737844 Brachypodium stacei
Brast06G092300 5.0kb upstream 5.0kb upstream 8985 true Chr06: 5737845-5746829 Brachypodium stacei
Brast06G092300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 5741830-5746829 Brachypodium stacei
Brast06G092300 5.0kb downstream 5.0kb downstream 8985 true Chr06: 5732845-5741829 Brachypodium stacei
Brast06G092300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 5732845-5737844 Brachypodium stacei
Brast06G092300 10.0kb upstream 10.0kb upstream 13985 true Chr06: 5737845-5751829 Brachypodium stacei
Brast06G092300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 5741830-5751829 Brachypodium stacei
Brast06G092300 10.0kb downstream 10.0kb downstream 13985 true Chr06: 5727845-5741829 Brachypodium stacei
Brast06G092300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 5727845-5737844 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586280 5269 Grass View MSA
122045440 5273 Angiosperm View MSA
121350923 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain