Gene : Brast06G007900 B. stacei v1.1
Defline:  (1 of 1) PTHR21256:SF2 - HISTIDINE BIOSYNTHESIS TRIFUNCTIONAL PROTEIN Genomic Order:  79
Name:  ? Brast06G007900 Secondary Identifier:  ? PAC:32850480
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei HISTSYN-PWY Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast06G007900 0.5kb upstream 0.5kb upstream 4038 true Chr06: 456789-460826 Brachypodium stacei
Brast06G007900 0.5kb upstream 0.5kb upstream 500 false Chr06: 456789-457288 Brachypodium stacei
Brast06G007900 0.5kb downstream 0.5kb downstream 4038 true Chr06: 457289-461326 Brachypodium stacei
Brast06G007900 0.5kb downstream 0.5kb downstream 500 false Chr06: 460827-461326 Brachypodium stacei
Brast06G007900 1.0kb upstream 1.0kb upstream 4538 true Chr06: 456289-460826 Brachypodium stacei
Brast06G007900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 456289-457288 Brachypodium stacei
Brast06G007900 1.0kb downstream 1.0kb downstream 4538 true Chr06: 457289-461826 Brachypodium stacei
Brast06G007900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 460827-461826 Brachypodium stacei
Brast06G007900 2.0kb upstream 2.0kb upstream 5538 true Chr06: 455289-460826 Brachypodium stacei
Brast06G007900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 455289-457288 Brachypodium stacei
Brast06G007900 2.0kb downstream 2.0kb downstream 5538 true Chr06: 457289-462826 Brachypodium stacei
Brast06G007900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 460827-462826 Brachypodium stacei
Brast06G007900 5.0kb upstream 5.0kb upstream 8538 true Chr06: 452289-460826 Brachypodium stacei
Brast06G007900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 452289-457288 Brachypodium stacei
Brast06G007900 5.0kb downstream 5.0kb downstream 8538 true Chr06: 457289-465826 Brachypodium stacei
Brast06G007900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 460827-465826 Brachypodium stacei
Brast06G007900 10.0kb upstream 10.0kb upstream 13538 true Chr06: 447289-460826 Brachypodium stacei
Brast06G007900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 447289-457288 Brachypodium stacei
Brast06G007900 10.0kb downstream 10.0kb downstream 13538 true Chr06: 457289-470826 Brachypodium stacei
Brast06G007900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 460827-470826 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569562 5269 Grass View MSA
122046994 5273 Angiosperm View MSA
121351553 5274 Embryophyte View MSA
123424167 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain