Gene : Brast07G186700 B. stacei v1.1
Defline:  (1 of 1) PTHR10920:SF12 - TRNA (CYTIDINE(32)/GUANOSINE(34)-2'-O)-METHYLTRANSFERASE-RELATED Genomic Order:  1867
Name:  ? Brast07G186700 Secondary Identifier:  ? PAC:32871063
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PWY-6829 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast07G186700 0.5kb upstream 0.5kb upstream 4804 true Chr07: 17050377-17055180 Brachypodium stacei
Brast07G186700 0.5kb upstream 0.5kb upstream 500 false Chr07: 17054681-17055180 Brachypodium stacei
Brast07G186700 0.5kb downstream 0.5kb downstream 4804 true Chr07: 17049877-17054680 Brachypodium stacei
Brast07G186700 0.5kb downstream 0.5kb downstream 500 false Chr07: 17049877-17050376 Brachypodium stacei
Brast07G186700 1.0kb upstream 1.0kb upstream 5304 true Chr07: 17050377-17055680 Brachypodium stacei
Brast07G186700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 17054681-17055680 Brachypodium stacei
Brast07G186700 1.0kb downstream 1.0kb downstream 5304 true Chr07: 17049377-17054680 Brachypodium stacei
Brast07G186700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 17049377-17050376 Brachypodium stacei
Brast07G186700 2.0kb upstream 2.0kb upstream 6304 true Chr07: 17050377-17056680 Brachypodium stacei
Brast07G186700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 17054681-17056680 Brachypodium stacei
Brast07G186700 2.0kb downstream 2.0kb downstream 6304 true Chr07: 17048377-17054680 Brachypodium stacei
Brast07G186700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 17048377-17050376 Brachypodium stacei
Brast07G186700 5.0kb upstream 5.0kb upstream 9304 true Chr07: 17050377-17059680 Brachypodium stacei
Brast07G186700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 17054681-17059680 Brachypodium stacei
Brast07G186700 5.0kb downstream 5.0kb downstream 9304 true Chr07: 17045377-17054680 Brachypodium stacei
Brast07G186700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 17045377-17050376 Brachypodium stacei
Brast07G186700 10.0kb upstream 10.0kb upstream 14304 true Chr07: 17050377-17064680 Brachypodium stacei
Brast07G186700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 17054681-17064680 Brachypodium stacei
Brast07G186700 10.0kb downstream 10.0kb downstream 14304 true Chr07: 17040377-17054680 Brachypodium stacei
Brast07G186700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 17040377-17050376 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575975 5269 Grass View MSA
122044785 5273 Angiosperm View MSA
121347520 5274 Embryophyte View MSA
123424894 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain