Gene : Brast08G176700 B. stacei v1.1
Defline:  (1 of 1) PTHR23163:SF0 - E3 UBIQUITIN-PROTEIN LIGASE BRE1 Genomic Order:  1767
Name:  ? Brast08G176700 Secondary Identifier:  ? PAC:32860879
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PWY-7511 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast08G176700 0.5kb upstream 0.5kb upstream 12731 true Chr08: 15381224-15393954 Brachypodium stacei
Brast08G176700 0.5kb upstream 0.5kb upstream 500 false Chr08: 15381224-15381723 Brachypodium stacei
Brast08G176700 0.5kb downstream 0.5kb downstream 12731 true Chr08: 15381724-15394454 Brachypodium stacei
Brast08G176700 0.5kb downstream 0.5kb downstream 500 false Chr08: 15393955-15394454 Brachypodium stacei
Brast08G176700 1.0kb upstream 1.0kb upstream 13231 true Chr08: 15380724-15393954 Brachypodium stacei
Brast08G176700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 15380724-15381723 Brachypodium stacei
Brast08G176700 1.0kb downstream 1.0kb downstream 13231 true Chr08: 15381724-15394954 Brachypodium stacei
Brast08G176700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 15393955-15394954 Brachypodium stacei
Brast08G176700 2.0kb upstream 2.0kb upstream 14231 true Chr08: 15379724-15393954 Brachypodium stacei
Brast08G176700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 15379724-15381723 Brachypodium stacei
Brast08G176700 2.0kb downstream 2.0kb downstream 14231 true Chr08: 15381724-15395954 Brachypodium stacei
Brast08G176700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 15393955-15395954 Brachypodium stacei
Brast08G176700 5.0kb upstream 5.0kb upstream 17231 true Chr08: 15376724-15393954 Brachypodium stacei
Brast08G176700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 15376724-15381723 Brachypodium stacei
Brast08G176700 5.0kb downstream 5.0kb downstream 17231 true Chr08: 15381724-15398954 Brachypodium stacei
Brast08G176700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 15393955-15398954 Brachypodium stacei
Brast08G176700 10.0kb upstream 10.0kb upstream 22231 true Chr08: 15371724-15393954 Brachypodium stacei
Brast08G176700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 15371724-15381723 Brachypodium stacei
Brast08G176700 10.0kb downstream 10.0kb downstream 22231 true Chr08: 15381724-15403954 Brachypodium stacei
Brast08G176700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 15393955-15403954 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578331 5269 Grass View MSA
122042098 5273 Angiosperm View MSA
121349326 5274 Embryophyte View MSA
123423997 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain