Gene : Brast08G048400 B. stacei v1.1
Defline:  (1 of 1) PTHR12526:SF304 - STARCH SYNTHASE 4, CHLOROPLASTIC/AMYLOPLASTIC-RELATED Genomic Order:  484
Name:  ? Brast08G048400 Secondary Identifier:  ? PAC:32862135
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei GLYCOGENSYNTH-PWY Brachypodium stacei pathologic  
Bstacei PWY-622 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast08G048400 0.5kb upstream 0.5kb upstream 8182 true Chr08: 2782406-2790587 Brachypodium stacei
Brast08G048400 0.5kb upstream 0.5kb upstream 500 false Chr08: 2790088-2790587 Brachypodium stacei
Brast08G048400 0.5kb downstream 0.5kb downstream 8182 true Chr08: 2781906-2790087 Brachypodium stacei
Brast08G048400 0.5kb downstream 0.5kb downstream 500 false Chr08: 2781906-2782405 Brachypodium stacei
Brast08G048400 1.0kb upstream 1.0kb upstream 8682 true Chr08: 2782406-2791087 Brachypodium stacei
Brast08G048400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2790088-2791087 Brachypodium stacei
Brast08G048400 1.0kb downstream 1.0kb downstream 8682 true Chr08: 2781406-2790087 Brachypodium stacei
Brast08G048400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2781406-2782405 Brachypodium stacei
Brast08G048400 2.0kb upstream 2.0kb upstream 9682 true Chr08: 2782406-2792087 Brachypodium stacei
Brast08G048400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2790088-2792087 Brachypodium stacei
Brast08G048400 2.0kb downstream 2.0kb downstream 9682 true Chr08: 2780406-2790087 Brachypodium stacei
Brast08G048400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2780406-2782405 Brachypodium stacei
Brast08G048400 5.0kb upstream 5.0kb upstream 12682 true Chr08: 2782406-2795087 Brachypodium stacei
Brast08G048400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2790088-2795087 Brachypodium stacei
Brast08G048400 5.0kb downstream 5.0kb downstream 12682 true Chr08: 2777406-2790087 Brachypodium stacei
Brast08G048400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2777406-2782405 Brachypodium stacei
Brast08G048400 10.0kb upstream 10.0kb upstream 17682 true Chr08: 2782406-2800087 Brachypodium stacei
Brast08G048400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2790088-2800087 Brachypodium stacei
Brast08G048400 10.0kb downstream 10.0kb downstream 17682 true Chr08: 2772406-2790087 Brachypodium stacei
Brast08G048400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2772406-2782405 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578861 5269 Grass View MSA
122042885 5273 Angiosperm View MSA
121344527 5274 Embryophyte View MSA
123428648 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain