Gene : Brast08G048500 B. stacei v1.1
Defline:  (1 of 2) PTHR23416//PTHR23416:SF67 - SIALIC ACID SYNTHASE-RELATED Genomic Order:  485
Name:  ? Brast08G048500 Secondary Identifier:  ? PAC:32859838
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei CYSTSYN-PWY Brachypodium stacei pathologic  
Bstacei PWY-6936 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast08G048500 0.5kb upstream 0.5kb upstream 1533 true Chr08: 2792262-2793794 Brachypodium stacei
Brast08G048500 0.5kb upstream 0.5kb upstream 500 false Chr08: 2792262-2792761 Brachypodium stacei
Brast08G048500 0.5kb downstream 0.5kb downstream 1533 true Chr08: 2792762-2794294 Brachypodium stacei
Brast08G048500 0.5kb downstream 0.5kb downstream 500 false Chr08: 2793795-2794294 Brachypodium stacei
Brast08G048500 1.0kb upstream 1.0kb upstream 2033 true Chr08: 2791762-2793794 Brachypodium stacei
Brast08G048500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2791762-2792761 Brachypodium stacei
Brast08G048500 1.0kb downstream 1.0kb downstream 2033 true Chr08: 2792762-2794794 Brachypodium stacei
Brast08G048500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2793795-2794794 Brachypodium stacei
Brast08G048500 2.0kb upstream 2.0kb upstream 3033 true Chr08: 2790762-2793794 Brachypodium stacei
Brast08G048500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2790762-2792761 Brachypodium stacei
Brast08G048500 2.0kb downstream 2.0kb downstream 3033 true Chr08: 2792762-2795794 Brachypodium stacei
Brast08G048500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2793795-2795794 Brachypodium stacei
Brast08G048500 5.0kb upstream 5.0kb upstream 6033 true Chr08: 2787762-2793794 Brachypodium stacei
Brast08G048500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2787762-2792761 Brachypodium stacei
Brast08G048500 5.0kb downstream 5.0kb downstream 6033 true Chr08: 2792762-2798794 Brachypodium stacei
Brast08G048500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2793795-2798794 Brachypodium stacei
Brast08G048500 10.0kb upstream 10.0kb upstream 11033 true Chr08: 2782762-2793794 Brachypodium stacei
Brast08G048500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2782762-2792761 Brachypodium stacei
Brast08G048500 10.0kb downstream 10.0kb downstream 11033 true Chr08: 2792762-2803794 Brachypodium stacei
Brast08G048500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2793795-2803794 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579116 5269 Grass View MSA
122047158 5273 Angiosperm View MSA
121348374 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain