Gene : Brast09G158800 B. stacei v1.1
Defline:  (1 of 2) PTHR12358//PTHR12358:SF39 - SPHINGOSINE KINASE Genomic Order:  1588
Name:  ? Brast09G158800 Secondary Identifier:  ? PAC:32854956
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PWY-5129 Brachypodium stacei pathologic  
Bstacei PWY-6483 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast09G158800 0.5kb upstream 0.5kb upstream 6979 true Chr09: 13913428-13920406 Brachypodium stacei
Brast09G158800 0.5kb upstream 0.5kb upstream 500 false Chr09: 13913428-13913927 Brachypodium stacei
Brast09G158800 0.5kb downstream 0.5kb downstream 6979 true Chr09: 13913928-13920906 Brachypodium stacei
Brast09G158800 0.5kb downstream 0.5kb downstream 500 false Chr09: 13920407-13920906 Brachypodium stacei
Brast09G158800 1.0kb upstream 1.0kb upstream 7479 true Chr09: 13912928-13920406 Brachypodium stacei
Brast09G158800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 13912928-13913927 Brachypodium stacei
Brast09G158800 1.0kb downstream 1.0kb downstream 7479 true Chr09: 13913928-13921406 Brachypodium stacei
Brast09G158800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 13920407-13921406 Brachypodium stacei
Brast09G158800 2.0kb upstream 2.0kb upstream 8479 true Chr09: 13911928-13920406 Brachypodium stacei
Brast09G158800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 13911928-13913927 Brachypodium stacei
Brast09G158800 2.0kb downstream 2.0kb downstream 8479 true Chr09: 13913928-13922406 Brachypodium stacei
Brast09G158800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 13920407-13922406 Brachypodium stacei
Brast09G158800 5.0kb upstream 5.0kb upstream 11479 true Chr09: 13908928-13920406 Brachypodium stacei
Brast09G158800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 13908928-13913927 Brachypodium stacei
Brast09G158800 5.0kb downstream 5.0kb downstream 11479 true Chr09: 13913928-13925406 Brachypodium stacei
Brast09G158800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 13920407-13925406 Brachypodium stacei
Brast09G158800 10.0kb upstream 10.0kb upstream 16479 true Chr09: 13903928-13920406 Brachypodium stacei
Brast09G158800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 13903928-13913927 Brachypodium stacei
Brast09G158800 10.0kb downstream 10.0kb downstream 16479 true Chr09: 13913928-13930406 Brachypodium stacei
Brast09G158800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 13920407-13930406 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569465 5269 Grass View MSA
122046814 5273 Angiosperm View MSA
121349004 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain