Gene : Brast09G013500 B. stacei v1.1
Defline:  (1 of 1) KOG0225 - Pyruvate dehydrogenase E1, alpha subunit Genomic Order:  135
Name:  ? Brast09G013500 Secondary Identifier:  ? PAC:32853089
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PWY-5173 Brachypodium stacei pathologic  
Bstacei PWY-5464 Brachypodium stacei pathologic  
Bstacei PYRUVDEHYD-PWY Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast09G013500 0.5kb upstream 0.5kb upstream 4305 true Chr09: 957229-961533 Brachypodium stacei
Brast09G013500 0.5kb upstream 0.5kb upstream 500 false Chr09: 961034-961533 Brachypodium stacei
Brast09G013500 0.5kb downstream 0.5kb downstream 4305 true Chr09: 956729-961033 Brachypodium stacei
Brast09G013500 0.5kb downstream 0.5kb downstream 500 false Chr09: 956729-957228 Brachypodium stacei
Brast09G013500 1.0kb upstream 1.0kb upstream 4805 true Chr09: 957229-962033 Brachypodium stacei
Brast09G013500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 961034-962033 Brachypodium stacei
Brast09G013500 1.0kb downstream 1.0kb downstream 4805 true Chr09: 956229-961033 Brachypodium stacei
Brast09G013500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 956229-957228 Brachypodium stacei
Brast09G013500 2.0kb upstream 2.0kb upstream 5805 true Chr09: 957229-963033 Brachypodium stacei
Brast09G013500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 961034-963033 Brachypodium stacei
Brast09G013500 2.0kb downstream 2.0kb downstream 5805 true Chr09: 955229-961033 Brachypodium stacei
Brast09G013500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 955229-957228 Brachypodium stacei
Brast09G013500 5.0kb upstream 5.0kb upstream 8805 true Chr09: 957229-966033 Brachypodium stacei
Brast09G013500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 961034-966033 Brachypodium stacei
Brast09G013500 5.0kb downstream 5.0kb downstream 8805 true Chr09: 952229-961033 Brachypodium stacei
Brast09G013500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 952229-957228 Brachypodium stacei
Brast09G013500 10.0kb upstream 10.0kb upstream 13805 true Chr09: 957229-971033 Brachypodium stacei
Brast09G013500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 961034-971033 Brachypodium stacei
Brast09G013500 10.0kb downstream 10.0kb downstream 13805 true Chr09: 947229-961033 Brachypodium stacei
Brast09G013500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 947229-957228 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579734 5269 Grass View MSA
122044804 5273 Angiosperm View MSA
121347425 5274 Embryophyte View MSA
123423942 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain