Gene : Brast09G038200 B. stacei v1.1
Defline:  (1 of 5) 4.1.1.39 - Ribulose-bisphosphate carboxylase / RuBP carboxylase Genomic Order:  382
Name:  ? Brast09G038200 Secondary Identifier:  ? PAC:32853096
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei CALVIN-PWY Brachypodium stacei pathologic  
Bstacei PHOTOALL-PWY Brachypodium stacei pathologic  
Bstacei PWY-5723 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast09G038200 0.5kb upstream 0.5kb upstream 1873 true Chr09: 2998352-3000224 Brachypodium stacei
Brast09G038200 0.5kb upstream 0.5kb upstream 500 false Chr09: 2998352-2998851 Brachypodium stacei
Brast09G038200 0.5kb downstream 0.5kb downstream 1873 true Chr09: 2998852-3000724 Brachypodium stacei
Brast09G038200 0.5kb downstream 0.5kb downstream 500 false Chr09: 3000225-3000724 Brachypodium stacei
Brast09G038200 1.0kb upstream 1.0kb upstream 2373 true Chr09: 2997852-3000224 Brachypodium stacei
Brast09G038200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 2997852-2998851 Brachypodium stacei
Brast09G038200 1.0kb downstream 1.0kb downstream 2373 true Chr09: 2998852-3001224 Brachypodium stacei
Brast09G038200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 3000225-3001224 Brachypodium stacei
Brast09G038200 2.0kb upstream 2.0kb upstream 3373 true Chr09: 2996852-3000224 Brachypodium stacei
Brast09G038200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 2996852-2998851 Brachypodium stacei
Brast09G038200 2.0kb downstream 2.0kb downstream 3373 true Chr09: 2998852-3002224 Brachypodium stacei
Brast09G038200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 3000225-3002224 Brachypodium stacei
Brast09G038200 5.0kb upstream 5.0kb upstream 6373 true Chr09: 2993852-3000224 Brachypodium stacei
Brast09G038200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 2993852-2998851 Brachypodium stacei
Brast09G038200 5.0kb downstream 5.0kb downstream 6373 true Chr09: 2998852-3005224 Brachypodium stacei
Brast09G038200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 3000225-3005224 Brachypodium stacei
Brast09G038200 10.0kb upstream 10.0kb upstream 11373 true Chr09: 2988852-3000224 Brachypodium stacei
Brast09G038200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 2988852-2998851 Brachypodium stacei
Brast09G038200 10.0kb downstream 10.0kb downstream 11373 true Chr09: 2998852-3010224 Brachypodium stacei
Brast09G038200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 3000225-3010224 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124590513 5269 Grass View MSA
122046951 5273 Angiosperm View MSA
121348432 5274 Embryophyte View MSA
123426346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain