Gene : Brast10G009800 B. stacei v1.1
Defline:  (1 of 4) 2.5.1.32 - 15-cis-phytoene synthase / PSase Genomic Order:  98
Name:  ? Brast10G009800 Secondary Identifier:  ? PAC:32847456
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei CAROTENOID-PWY Brachypodium stacei pathologic  
Bstacei PWY-6475 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast10G009800 0.5kb upstream 0.5kb upstream 3786 true Chr10: 577285-581070 Brachypodium stacei
Brast10G009800 0.5kb upstream 0.5kb upstream 500 false Chr10: 580571-581070 Brachypodium stacei
Brast10G009800 0.5kb downstream 0.5kb downstream 3786 true Chr10: 576785-580570 Brachypodium stacei
Brast10G009800 0.5kb downstream 0.5kb downstream 500 false Chr10: 576785-577284 Brachypodium stacei
Brast10G009800 1.0kb upstream 1.0kb upstream 4286 true Chr10: 577285-581570 Brachypodium stacei
Brast10G009800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 580571-581570 Brachypodium stacei
Brast10G009800 1.0kb downstream 1.0kb downstream 4286 true Chr10: 576285-580570 Brachypodium stacei
Brast10G009800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 576285-577284 Brachypodium stacei
Brast10G009800 2.0kb upstream 2.0kb upstream 5286 true Chr10: 577285-582570 Brachypodium stacei
Brast10G009800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 580571-582570 Brachypodium stacei
Brast10G009800 2.0kb downstream 2.0kb downstream 5286 true Chr10: 575285-580570 Brachypodium stacei
Brast10G009800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 575285-577284 Brachypodium stacei
Brast10G009800 5.0kb upstream 5.0kb upstream 8286 true Chr10: 577285-585570 Brachypodium stacei
Brast10G009800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 580571-585570 Brachypodium stacei
Brast10G009800 5.0kb downstream 5.0kb downstream 8286 true Chr10: 572285-580570 Brachypodium stacei
Brast10G009800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 572285-577284 Brachypodium stacei
Brast10G009800 10.0kb upstream 10.0kb upstream 13286 true Chr10: 577285-590570 Brachypodium stacei
Brast10G009800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 580571-590570 Brachypodium stacei
Brast10G009800 10.0kb downstream 10.0kb downstream 13286 true Chr10: 567285-580570 Brachypodium stacei
Brast10G009800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 567285-577284 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
124573872 5269 Grass View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain