Gene : Brast09G087700 B. stacei v1.1
Defline:  (1 of 63) PF04564 - U-box domain (U-box) Genomic Order:  877
Name:  ? Brast09G087700 Secondary Identifier:  ? PAC:32853160
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PWY-7511 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast09G087700 0.5kb upstream 0.5kb upstream 2413 true Chr09: 9047778-9050190 Brachypodium stacei
Brast09G087700 0.5kb upstream 0.5kb upstream 500 false Chr09: 9047778-9048277 Brachypodium stacei
Brast09G087700 0.5kb downstream 0.5kb downstream 2413 true Chr09: 9048278-9050690 Brachypodium stacei
Brast09G087700 0.5kb downstream 0.5kb downstream 500 false Chr09: 9050191-9050690 Brachypodium stacei
Brast09G087700 1.0kb upstream 1.0kb upstream 2913 true Chr09: 9047278-9050190 Brachypodium stacei
Brast09G087700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 9047278-9048277 Brachypodium stacei
Brast09G087700 1.0kb downstream 1.0kb downstream 2913 true Chr09: 9048278-9051190 Brachypodium stacei
Brast09G087700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 9050191-9051190 Brachypodium stacei
Brast09G087700 2.0kb upstream 2.0kb upstream 3913 true Chr09: 9046278-9050190 Brachypodium stacei
Brast09G087700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 9046278-9048277 Brachypodium stacei
Brast09G087700 2.0kb downstream 2.0kb downstream 3913 true Chr09: 9048278-9052190 Brachypodium stacei
Brast09G087700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 9050191-9052190 Brachypodium stacei
Brast09G087700 5.0kb upstream 5.0kb upstream 6913 true Chr09: 9043278-9050190 Brachypodium stacei
Brast09G087700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 9043278-9048277 Brachypodium stacei
Brast09G087700 5.0kb downstream 5.0kb downstream 6913 true Chr09: 9048278-9055190 Brachypodium stacei
Brast09G087700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 9050191-9055190 Brachypodium stacei
Brast09G087700 10.0kb upstream 10.0kb upstream 11913 true Chr09: 9038278-9050190 Brachypodium stacei
Brast09G087700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 9038278-9048277 Brachypodium stacei
Brast09G087700 10.0kb downstream 10.0kb downstream 11913 true Chr09: 9048278-9060190 Brachypodium stacei
Brast09G087700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 9050191-9060190 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572452 5269 Grass View MSA
122048666 5273 Angiosperm View MSA
121311065 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain