Gene : Brast10G040100 B. stacei v1.1
Defline:  (1 of 1) PTHR31689:SF0 - DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC Genomic Order:  401
Name:  ? Brast10G040100 Secondary Identifier:  ? PAC:32847094
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PWY-5097 Brachypodium stacei pathologic  
Bstacei PWY-724 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast10G040100 0.5kb upstream 0.5kb upstream 6285 true Chr10: 2636850-2643134 Brachypodium stacei
Brast10G040100 0.5kb upstream 0.5kb upstream 500 false Chr10: 2636850-2637349 Brachypodium stacei
Brast10G040100 0.5kb downstream 0.5kb downstream 6285 true Chr10: 2637350-2643634 Brachypodium stacei
Brast10G040100 0.5kb downstream 0.5kb downstream 500 false Chr10: 2643135-2643634 Brachypodium stacei
Brast10G040100 1.0kb upstream 1.0kb upstream 6785 true Chr10: 2636350-2643134 Brachypodium stacei
Brast10G040100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 2636350-2637349 Brachypodium stacei
Brast10G040100 1.0kb downstream 1.0kb downstream 6785 true Chr10: 2637350-2644134 Brachypodium stacei
Brast10G040100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 2643135-2644134 Brachypodium stacei
Brast10G040100 2.0kb upstream 2.0kb upstream 7785 true Chr10: 2635350-2643134 Brachypodium stacei
Brast10G040100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 2635350-2637349 Brachypodium stacei
Brast10G040100 2.0kb downstream 2.0kb downstream 7785 true Chr10: 2637350-2645134 Brachypodium stacei
Brast10G040100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 2643135-2645134 Brachypodium stacei
Brast10G040100 5.0kb upstream 5.0kb upstream 10785 true Chr10: 2632350-2643134 Brachypodium stacei
Brast10G040100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 2632350-2637349 Brachypodium stacei
Brast10G040100 5.0kb downstream 5.0kb downstream 10785 true Chr10: 2637350-2648134 Brachypodium stacei
Brast10G040100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 2643135-2648134 Brachypodium stacei
Brast10G040100 10.0kb upstream 10.0kb upstream 15785 true Chr10: 2627350-2643134 Brachypodium stacei
Brast10G040100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 2627350-2637349 Brachypodium stacei
Brast10G040100 10.0kb downstream 10.0kb downstream 15785 true Chr10: 2637350-2653134 Brachypodium stacei
Brast10G040100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 2643135-2653134 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587205 5269 Grass View MSA
122047257 5273 Angiosperm View MSA
121347599 5274 Embryophyte View MSA
123423863 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain