Gene : Brast10G065400 B. stacei v1.1
Defline:  (1 of 2) 1.1.1.25 - Shikimate dehydrogenase / Shikimate:NADP(+) oxidoreductase Genomic Order:  654
Name:  ? Brast10G065400 Secondary Identifier:  ? PAC:32848503
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei ARO-PWY Brachypodium stacei pathologic  
Bstacei PWY-6163 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast10G065400 0.5kb upstream 0.5kb upstream 5118 true Chr10: 4386753-4391870 Brachypodium stacei
Brast10G065400 0.5kb upstream 0.5kb upstream 500 false Chr10: 4386753-4387252 Brachypodium stacei
Brast10G065400 0.5kb downstream 0.5kb downstream 5118 true Chr10: 4387253-4392370 Brachypodium stacei
Brast10G065400 0.5kb downstream 0.5kb downstream 500 false Chr10: 4391871-4392370 Brachypodium stacei
Brast10G065400 1.0kb upstream 1.0kb upstream 5618 true Chr10: 4386253-4391870 Brachypodium stacei
Brast10G065400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 4386253-4387252 Brachypodium stacei
Brast10G065400 1.0kb downstream 1.0kb downstream 5618 true Chr10: 4387253-4392870 Brachypodium stacei
Brast10G065400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 4391871-4392870 Brachypodium stacei
Brast10G065400 2.0kb upstream 2.0kb upstream 6618 true Chr10: 4385253-4391870 Brachypodium stacei
Brast10G065400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 4385253-4387252 Brachypodium stacei
Brast10G065400 2.0kb downstream 2.0kb downstream 6618 true Chr10: 4387253-4393870 Brachypodium stacei
Brast10G065400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 4391871-4393870 Brachypodium stacei
Brast10G065400 5.0kb upstream 5.0kb upstream 9618 true Chr10: 4382253-4391870 Brachypodium stacei
Brast10G065400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 4382253-4387252 Brachypodium stacei
Brast10G065400 5.0kb downstream 5.0kb downstream 9618 true Chr10: 4387253-4396870 Brachypodium stacei
Brast10G065400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 4391871-4396870 Brachypodium stacei
Brast10G065400 10.0kb upstream 10.0kb upstream 14618 true Chr10: 4377253-4391870 Brachypodium stacei
Brast10G065400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 4377253-4387252 Brachypodium stacei
Brast10G065400 10.0kb downstream 10.0kb downstream 14618 true Chr10: 4387253-4401870 Brachypodium stacei
Brast10G065400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 4391871-4401870 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583290 5269 Grass View MSA
122045026 5273 Angiosperm View MSA
121345779 5274 Embryophyte View MSA
123427556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain