Gene : Brast10G065700 B. stacei v1.1
Defline:  (1 of 1) PTHR11538:SF41 - PHENYLALANINE--TRNA LIGASE, MITOCHONDRIAL Genomic Order:  657
Name:  ? Brast10G065700 Secondary Identifier:  ? PAC:32848784
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei TRNA-CHARGING-PWY Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast10G065700 0.5kb upstream 0.5kb upstream 5342 true Chr10: 4403662-4409003 Brachypodium stacei
Brast10G065700 0.5kb upstream 0.5kb upstream 500 false Chr10: 4408504-4409003 Brachypodium stacei
Brast10G065700 0.5kb downstream 0.5kb downstream 5342 true Chr10: 4403162-4408503 Brachypodium stacei
Brast10G065700 0.5kb downstream 0.5kb downstream 500 false Chr10: 4403162-4403661 Brachypodium stacei
Brast10G065700 1.0kb upstream 1.0kb upstream 5842 true Chr10: 4403662-4409503 Brachypodium stacei
Brast10G065700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 4408504-4409503 Brachypodium stacei
Brast10G065700 1.0kb downstream 1.0kb downstream 5842 true Chr10: 4402662-4408503 Brachypodium stacei
Brast10G065700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 4402662-4403661 Brachypodium stacei
Brast10G065700 2.0kb upstream 2.0kb upstream 6842 true Chr10: 4403662-4410503 Brachypodium stacei
Brast10G065700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 4408504-4410503 Brachypodium stacei
Brast10G065700 2.0kb downstream 2.0kb downstream 6842 true Chr10: 4401662-4408503 Brachypodium stacei
Brast10G065700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 4401662-4403661 Brachypodium stacei
Brast10G065700 5.0kb upstream 5.0kb upstream 9842 true Chr10: 4403662-4413503 Brachypodium stacei
Brast10G065700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 4408504-4413503 Brachypodium stacei
Brast10G065700 5.0kb downstream 5.0kb downstream 9842 true Chr10: 4398662-4408503 Brachypodium stacei
Brast10G065700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 4398662-4403661 Brachypodium stacei
Brast10G065700 10.0kb upstream 10.0kb upstream 14842 true Chr10: 4403662-4418503 Brachypodium stacei
Brast10G065700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 4408504-4418503 Brachypodium stacei
Brast10G065700 10.0kb downstream 10.0kb downstream 14842 true Chr10: 4393662-4408503 Brachypodium stacei
Brast10G065700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 4393662-4403661 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578651 5269 Grass View MSA
122044413 5273 Angiosperm View MSA
121344364 5274 Embryophyte View MSA
123424081 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain