Gene : Brast10G107800 B. stacei v1.1
Defline:  (1 of 5) 4.1.1.39 - Ribulose-bisphosphate carboxylase / RuBP carboxylase Genomic Order:  1078
Name:  ? Brast10G107800 Secondary Identifier:  ? PAC:32848934
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei CALVIN-PWY Brachypodium stacei pathologic  
Bstacei PHOTOALL-PWY Brachypodium stacei pathologic  
Bstacei PWY-5723 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast10G107800 0.5kb upstream 0.5kb upstream 1416 true Chr10: 9007093-9008508 Brachypodium stacei
Brast10G107800 0.5kb upstream 0.5kb upstream 500 false Chr10: 9007093-9007592 Brachypodium stacei
Brast10G107800 0.5kb downstream 0.5kb downstream 1416 true Chr10: 9007593-9009008 Brachypodium stacei
Brast10G107800 0.5kb downstream 0.5kb downstream 500 false Chr10: 9008509-9009008 Brachypodium stacei
Brast10G107800 1.0kb upstream 1.0kb upstream 1916 true Chr10: 9006593-9008508 Brachypodium stacei
Brast10G107800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 9006593-9007592 Brachypodium stacei
Brast10G107800 1.0kb downstream 1.0kb downstream 1916 true Chr10: 9007593-9009508 Brachypodium stacei
Brast10G107800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 9008509-9009508 Brachypodium stacei
Brast10G107800 2.0kb upstream 2.0kb upstream 2916 true Chr10: 9005593-9008508 Brachypodium stacei
Brast10G107800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 9005593-9007592 Brachypodium stacei
Brast10G107800 2.0kb downstream 2.0kb downstream 2916 true Chr10: 9007593-9010508 Brachypodium stacei
Brast10G107800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 9008509-9010508 Brachypodium stacei
Brast10G107800 5.0kb upstream 5.0kb upstream 5916 true Chr10: 9002593-9008508 Brachypodium stacei
Brast10G107800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 9002593-9007592 Brachypodium stacei
Brast10G107800 5.0kb downstream 5.0kb downstream 5916 true Chr10: 9007593-9013508 Brachypodium stacei
Brast10G107800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 9008509-9013508 Brachypodium stacei
Brast10G107800 10.0kb upstream 10.0kb upstream 10916 true Chr10: 8997593-9008508 Brachypodium stacei
Brast10G107800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 8997593-9007592 Brachypodium stacei
Brast10G107800 10.0kb downstream 10.0kb downstream 10916 true Chr10: 9007593-9018508 Brachypodium stacei
Brast10G107800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 9008509-9018508 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124590513 5269 Grass View MSA
122046951 5273 Angiosperm View MSA
121348432 5274 Embryophyte View MSA
123426346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain