Gene : Vocar.0002s0050 V. carteri v2.1
Defline:  (1 of 30) PTHR21649//PTHR21649:SF8 - CHLOROPHYLL A/B BINDING PROTEIN Genomic Order:  50
Name:  ? Vocar.0002s0050 Secondary Identifier:  ? PAC:32890818
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vcarteri PHOTOALL-PWY Volvox carteri pathologic  
Vcarteri PWY-101 Volvox carteri pathologic  
Vcarteri PWY-7731 Volvox carteri pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Vocar.0002s0050 0.5kb upstream 0.5kb upstream 2247 true scaffold_2: 322836-325082 Volvox carteri
Vocar.0002s0050 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 324583-325082 Volvox carteri
Vocar.0002s0050 0.5kb downstream 0.5kb downstream 2247 true scaffold_2: 322336-324582 Volvox carteri
Vocar.0002s0050 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 322336-322835 Volvox carteri
Vocar.0002s0050 1.0kb upstream 1.0kb upstream 2747 true scaffold_2: 322836-325582 Volvox carteri
Vocar.0002s0050 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 324583-325582 Volvox carteri
Vocar.0002s0050 1.0kb downstream 1.0kb downstream 2747 true scaffold_2: 321836-324582 Volvox carteri
Vocar.0002s0050 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 321836-322835 Volvox carteri
Vocar.0002s0050 2.0kb upstream 2.0kb upstream 3747 true scaffold_2: 322836-326582 Volvox carteri
Vocar.0002s0050 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 324583-326582 Volvox carteri
Vocar.0002s0050 2.0kb downstream 2.0kb downstream 3747 true scaffold_2: 320836-324582 Volvox carteri
Vocar.0002s0050 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 320836-322835 Volvox carteri
Vocar.0002s0050 5.0kb upstream 5.0kb upstream 6747 true scaffold_2: 322836-329582 Volvox carteri
Vocar.0002s0050 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 324583-329582 Volvox carteri
Vocar.0002s0050 5.0kb downstream 5.0kb downstream 6747 true scaffold_2: 317836-324582 Volvox carteri
Vocar.0002s0050 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 317836-322835 Volvox carteri
Vocar.0002s0050 10.0kb upstream 10.0kb upstream 11747 true scaffold_2: 322836-334582 Volvox carteri
Vocar.0002s0050 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 324583-334582 Volvox carteri
Vocar.0002s0050 10.0kb downstream 10.0kb downstream 11747 true scaffold_2: 312836-324582 Volvox carteri
Vocar.0002s0050 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 312836-322835 Volvox carteri

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113612 5260 Chlorophyte View MSA
123426313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain