Gene : Vocar.0002s0044 V. carteri v2.1
Defline:  (1 of 30) PTHR21649//PTHR21649:SF8 - CHLOROPHYLL A/B BINDING PROTEIN Genomic Order:  44
Name:  ? Vocar.0002s0044 Secondary Identifier:  ? PAC:32890554
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vcarteri PHOTOALL-PWY Volvox carteri pathologic  
Vcarteri PWY-101 Volvox carteri pathologic  
Vcarteri PWY-7731 Volvox carteri pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Vocar.0002s0044 0.5kb upstream 0.5kb upstream 3479 true scaffold_2: 293139-296617 Volvox carteri
Vocar.0002s0044 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 296118-296617 Volvox carteri
Vocar.0002s0044 0.5kb downstream 0.5kb downstream 3479 true scaffold_2: 292639-296117 Volvox carteri
Vocar.0002s0044 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 292639-293138 Volvox carteri
Vocar.0002s0044 1.0kb upstream 1.0kb upstream 3979 true scaffold_2: 293139-297117 Volvox carteri
Vocar.0002s0044 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 296118-297117 Volvox carteri
Vocar.0002s0044 1.0kb downstream 1.0kb downstream 3979 true scaffold_2: 292139-296117 Volvox carteri
Vocar.0002s0044 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 292139-293138 Volvox carteri
Vocar.0002s0044 2.0kb upstream 2.0kb upstream 4979 true scaffold_2: 293139-298117 Volvox carteri
Vocar.0002s0044 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 296118-298117 Volvox carteri
Vocar.0002s0044 2.0kb downstream 2.0kb downstream 4979 true scaffold_2: 291139-296117 Volvox carteri
Vocar.0002s0044 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 291139-293138 Volvox carteri
Vocar.0002s0044 5.0kb upstream 5.0kb upstream 7979 true scaffold_2: 293139-301117 Volvox carteri
Vocar.0002s0044 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 296118-301117 Volvox carteri
Vocar.0002s0044 5.0kb downstream 5.0kb downstream 7979 true scaffold_2: 288139-296117 Volvox carteri
Vocar.0002s0044 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 288139-293138 Volvox carteri
Vocar.0002s0044 10.0kb upstream 10.0kb upstream 12979 true scaffold_2: 293139-306117 Volvox carteri
Vocar.0002s0044 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 296118-306117 Volvox carteri
Vocar.0002s0044 10.0kb downstream 10.0kb downstream 12979 true scaffold_2: 283139-296117 Volvox carteri
Vocar.0002s0044 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 283139-293138 Volvox carteri

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113612 5260 Chlorophyte View MSA
123426313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain