Gene : Vocar.0018s0172 V. carteri v2.1
Defline:  (1 of 4) 1.13.11.70 - All-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase / Carotenoid cleavage dioxygenase 8 Genomic Order:  172
Name:  ? Vocar.0018s0172 Secondary Identifier:  ? PAC:32898711
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vcarteri PWY-7101 Volvox carteri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Vocar.0018s0172 0.5kb upstream 0.5kb upstream 6364 true scaffold_18: 1384920-1391283 Volvox carteri
Vocar.0018s0172 0.5kb upstream 0.5kb upstream 500 false scaffold_18: 1384920-1385419 Volvox carteri
Vocar.0018s0172 0.5kb downstream 0.5kb downstream 6364 true scaffold_18: 1385420-1391783 Volvox carteri
Vocar.0018s0172 0.5kb downstream 0.5kb downstream 500 false scaffold_18: 1391284-1391783 Volvox carteri
Vocar.0018s0172 1.0kb upstream 1.0kb upstream 6864 true scaffold_18: 1384420-1391283 Volvox carteri
Vocar.0018s0172 1.0kb upstream 1.0kb upstream 1000 false scaffold_18: 1384420-1385419 Volvox carteri
Vocar.0018s0172 1.0kb downstream 1.0kb downstream 6864 true scaffold_18: 1385420-1392283 Volvox carteri
Vocar.0018s0172 1.0kb downstream 1.0kb downstream 1000 false scaffold_18: 1391284-1392283 Volvox carteri
Vocar.0018s0172 2.0kb upstream 2.0kb upstream 7864 true scaffold_18: 1383420-1391283 Volvox carteri
Vocar.0018s0172 2.0kb upstream 2.0kb upstream 2000 false scaffold_18: 1383420-1385419 Volvox carteri
Vocar.0018s0172 2.0kb downstream 2.0kb downstream 7864 true scaffold_18: 1385420-1393283 Volvox carteri
Vocar.0018s0172 2.0kb downstream 2.0kb downstream 2000 false scaffold_18: 1391284-1393283 Volvox carteri
Vocar.0018s0172 5.0kb upstream 5.0kb upstream 10864 true scaffold_18: 1380420-1391283 Volvox carteri
Vocar.0018s0172 5.0kb upstream 5.0kb upstream 5000 false scaffold_18: 1380420-1385419 Volvox carteri
Vocar.0018s0172 5.0kb downstream 5.0kb downstream 10864 true scaffold_18: 1385420-1396283 Volvox carteri
Vocar.0018s0172 5.0kb downstream 5.0kb downstream 5000 false scaffold_18: 1391284-1396283 Volvox carteri
Vocar.0018s0172 10.0kb upstream 10.0kb upstream 15864 true scaffold_18: 1375420-1391283 Volvox carteri
Vocar.0018s0172 10.0kb upstream 10.0kb upstream 10000 false scaffold_18: 1375420-1385419 Volvox carteri
Vocar.0018s0172 10.0kb downstream 10.0kb downstream 15864 true scaffold_18: 1385420-1401283 Volvox carteri
Vocar.0018s0172 10.0kb downstream 10.0kb downstream 10000 false scaffold_18: 1391284-1401283 Volvox carteri

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124098257 5260 Chlorophyte View MSA
123428919 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain