Gene : Vocar.0002s0496 V. carteri v2.1

Defline:  (1 of 3) K00850 - 6-phosphofructokinase 1 (pfkA, PFK) Description:  phosphofructokinase (phosphofructo-1-kinase); phosphofructokinase family protein; pyrophosphate-dependent enzyme; catalyses the phosphorylation of fructose-6-phosphate to fructose-1,6-bisphosphate; key regulatory step in the glycolytic pathway.
Genomic Order:  496 Name:  ? Vocar.0002s0496
Secondary Identifier:  ? PAC:32891008

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vcarteri ANAGLYCOLYSIS-PWY Volvox carteri pathologic  
Vcarteri PWY-1042 Volvox carteri pathologic  
Vcarteri PWY-5464 Volvox carteri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Vocar.0002s0496 0.5kb upstream 0.5kb upstream 7757 true scaffold_2: 3695106-3702862 Volvox carteri
Vocar.0002s0496 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 3695106-3695605 Volvox carteri
Vocar.0002s0496 0.5kb downstream 0.5kb downstream 7757 true scaffold_2: 3695606-3703362 Volvox carteri
Vocar.0002s0496 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 3702863-3703362 Volvox carteri
Vocar.0002s0496 1.0kb upstream 1.0kb upstream 8257 true scaffold_2: 3694606-3702862 Volvox carteri
Vocar.0002s0496 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 3694606-3695605 Volvox carteri
Vocar.0002s0496 1.0kb downstream 1.0kb downstream 8257 true scaffold_2: 3695606-3703862 Volvox carteri
Vocar.0002s0496 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 3702863-3703862 Volvox carteri
Vocar.0002s0496 2.0kb upstream 2.0kb upstream 9257 true scaffold_2: 3693606-3702862 Volvox carteri
Vocar.0002s0496 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 3693606-3695605 Volvox carteri
Vocar.0002s0496 2.0kb downstream 2.0kb downstream 9257 true scaffold_2: 3695606-3704862 Volvox carteri
Vocar.0002s0496 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 3702863-3704862 Volvox carteri
Vocar.0002s0496 5.0kb upstream 5.0kb upstream 12257 true scaffold_2: 3690606-3702862 Volvox carteri
Vocar.0002s0496 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 3690606-3695605 Volvox carteri
Vocar.0002s0496 5.0kb downstream 5.0kb downstream 12257 true scaffold_2: 3695606-3707862 Volvox carteri
Vocar.0002s0496 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 3702863-3707862 Volvox carteri
Vocar.0002s0496 10.0kb upstream 10.0kb upstream 17257 true scaffold_2: 3685606-3702862 Volvox carteri
Vocar.0002s0496 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 3685606-3695605 Volvox carteri
Vocar.0002s0496 10.0kb downstream 10.0kb downstream 17257 true scaffold_2: 3695606-3712862 Volvox carteri
Vocar.0002s0496 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 3702863-3712862 Volvox carteri

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111688 5260 Chlorophyte View MSA
123424464 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain