Gene : Vocar.0028s0183 V. carteri v2.1
Defline:  (1 of 1) PTHR10755:SF0 - OXYGEN-DEPENDENT COPROPORPHYRINOGEN-III OXIDASE, MITOCHONDRIAL Description:  coproporphyrinogen III oxidase (CPO, HEM13), chloroplast precursor.
Genomic Order:  183 Name:  ? Vocar.0028s0183
Secondary Identifier:  ? PAC:32895648
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vcarteri CHLOROPHYLL-SYN Volvox carteri pathologic  
Vcarteri HEME-BIOSYNTHESIS-II Volvox carteri pathologic  
Vcarteri PWY-7159 Volvox carteri pathologic  

Genomics

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Expression

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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Vocar.0028s0183 0.5kb upstream 0.5kb upstream 3737 true scaffold_28: 1655220-1658956 Volvox carteri
Vocar.0028s0183 0.5kb upstream 0.5kb upstream 500 false scaffold_28: 1658457-1658956 Volvox carteri
Vocar.0028s0183 0.5kb downstream 0.5kb downstream 3737 true scaffold_28: 1654720-1658456 Volvox carteri
Vocar.0028s0183 0.5kb downstream 0.5kb downstream 500 false scaffold_28: 1654720-1655219 Volvox carteri
Vocar.0028s0183 1.0kb upstream 1.0kb upstream 4237 true scaffold_28: 1655220-1659456 Volvox carteri
Vocar.0028s0183 1.0kb upstream 1.0kb upstream 1000 false scaffold_28: 1658457-1659456 Volvox carteri
Vocar.0028s0183 1.0kb downstream 1.0kb downstream 4237 true scaffold_28: 1654220-1658456 Volvox carteri
Vocar.0028s0183 1.0kb downstream 1.0kb downstream 1000 false scaffold_28: 1654220-1655219 Volvox carteri
Vocar.0028s0183 2.0kb upstream 2.0kb upstream 5237 true scaffold_28: 1655220-1660456 Volvox carteri
Vocar.0028s0183 2.0kb upstream 2.0kb upstream 2000 false scaffold_28: 1658457-1660456 Volvox carteri
Vocar.0028s0183 2.0kb downstream 2.0kb downstream 5237 true scaffold_28: 1653220-1658456 Volvox carteri
Vocar.0028s0183 2.0kb downstream 2.0kb downstream 2000 false scaffold_28: 1653220-1655219 Volvox carteri
Vocar.0028s0183 5.0kb upstream 5.0kb upstream 8237 true scaffold_28: 1655220-1663456 Volvox carteri
Vocar.0028s0183 5.0kb upstream 5.0kb upstream 5000 false scaffold_28: 1658457-1663456 Volvox carteri
Vocar.0028s0183 5.0kb downstream 5.0kb downstream 8237 true scaffold_28: 1650220-1658456 Volvox carteri
Vocar.0028s0183 5.0kb downstream 5.0kb downstream 5000 false scaffold_28: 1650220-1655219 Volvox carteri
Vocar.0028s0183 10.0kb upstream 10.0kb upstream 13237 true scaffold_28: 1655220-1668456 Volvox carteri
Vocar.0028s0183 10.0kb upstream 10.0kb upstream 10000 false scaffold_28: 1658457-1668456 Volvox carteri
Vocar.0028s0183 10.0kb downstream 10.0kb downstream 13237 true scaffold_28: 1645220-1658456 Volvox carteri
Vocar.0028s0183 10.0kb downstream 10.0kb downstream 10000 false scaffold_28: 1645220-1655219 Volvox carteri

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109621 5260 Chlorophyte View MSA
123424727 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain