Gene : Vocar.0029s0089 V. carteri v2.1
Defline:  (1 of 4) PF08190 - pre-RNA processing PIH1/Nop17 (PIH1) Description:  protein conserved only in organisms with motile cilia (Mot48); identified by comparative genomics as being present only in organisms having motile cilia.
Genomic Order:  89 Name:  ? Vocar.0029s0089
Secondary Identifier:  ? PAC:32887344
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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Vocar.0029s0089 0.5kb upstream 0.5kb upstream 5126 true scaffold_29: 799904-805029 Volvox carteri
Vocar.0029s0089 0.5kb upstream 0.5kb upstream 500 false scaffold_29: 799904-800403 Volvox carteri
Vocar.0029s0089 0.5kb downstream 0.5kb downstream 5126 true scaffold_29: 800404-805529 Volvox carteri
Vocar.0029s0089 0.5kb downstream 0.5kb downstream 500 false scaffold_29: 805030-805529 Volvox carteri
Vocar.0029s0089 1.0kb upstream 1.0kb upstream 5626 true scaffold_29: 799404-805029 Volvox carteri
Vocar.0029s0089 1.0kb upstream 1.0kb upstream 1000 false scaffold_29: 799404-800403 Volvox carteri
Vocar.0029s0089 1.0kb downstream 1.0kb downstream 5626 true scaffold_29: 800404-806029 Volvox carteri
Vocar.0029s0089 1.0kb downstream 1.0kb downstream 1000 false scaffold_29: 805030-806029 Volvox carteri
Vocar.0029s0089 2.0kb upstream 2.0kb upstream 6626 true scaffold_29: 798404-805029 Volvox carteri
Vocar.0029s0089 2.0kb upstream 2.0kb upstream 2000 false scaffold_29: 798404-800403 Volvox carteri
Vocar.0029s0089 2.0kb downstream 2.0kb downstream 6626 true scaffold_29: 800404-807029 Volvox carteri
Vocar.0029s0089 2.0kb downstream 2.0kb downstream 2000 false scaffold_29: 805030-807029 Volvox carteri
Vocar.0029s0089 5.0kb upstream 5.0kb upstream 9626 true scaffold_29: 795404-805029 Volvox carteri
Vocar.0029s0089 5.0kb upstream 5.0kb upstream 5000 false scaffold_29: 795404-800403 Volvox carteri
Vocar.0029s0089 5.0kb downstream 5.0kb downstream 9626 true scaffold_29: 800404-810029 Volvox carteri
Vocar.0029s0089 5.0kb downstream 5.0kb downstream 5000 false scaffold_29: 805030-810029 Volvox carteri
Vocar.0029s0089 10.0kb upstream 10.0kb upstream 14626 true scaffold_29: 790404-805029 Volvox carteri
Vocar.0029s0089 10.0kb upstream 10.0kb upstream 10000 false scaffold_29: 790404-800403 Volvox carteri
Vocar.0029s0089 10.0kb downstream 10.0kb downstream 14626 true scaffold_29: 800404-815029 Volvox carteri
Vocar.0029s0089 10.0kb downstream 10.0kb downstream 10000 false scaffold_29: 805030-815029 Volvox carteri

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111265 5260 Chlorophyte View MSA
123427362 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain