Gene : Vocar.0027s0175 V. carteri v2.1
Defline:  (1 of 2) 2.5.1.32 - 15-cis-phytoene synthase / PSase Genomic Order:  175
Name:  ? Vocar.0027s0175 Secondary Identifier:  ? PAC:32887239
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vcarteri CAROTENOID-PWY Volvox carteri pathologic  
Vcarteri PWY-6287 Volvox carteri pathologic  
Vcarteri PWY-6475 Volvox carteri pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Vocar.0027s0175 0.5kb upstream 0.5kb upstream 7678 true scaffold_27: 1630403-1638080 Volvox carteri
Vocar.0027s0175 0.5kb upstream 0.5kb upstream 500 false scaffold_27: 1637581-1638080 Volvox carteri
Vocar.0027s0175 0.5kb downstream 0.5kb downstream 7678 true scaffold_27: 1629903-1637580 Volvox carteri
Vocar.0027s0175 0.5kb downstream 0.5kb downstream 500 false scaffold_27: 1629903-1630402 Volvox carteri
Vocar.0027s0175 1.0kb upstream 1.0kb upstream 8178 true scaffold_27: 1630403-1638580 Volvox carteri
Vocar.0027s0175 1.0kb upstream 1.0kb upstream 1000 false scaffold_27: 1637581-1638580 Volvox carteri
Vocar.0027s0175 1.0kb downstream 1.0kb downstream 8178 true scaffold_27: 1629403-1637580 Volvox carteri
Vocar.0027s0175 1.0kb downstream 1.0kb downstream 1000 false scaffold_27: 1629403-1630402 Volvox carteri
Vocar.0027s0175 2.0kb upstream 2.0kb upstream 9178 true scaffold_27: 1630403-1639580 Volvox carteri
Vocar.0027s0175 2.0kb upstream 2.0kb upstream 2000 false scaffold_27: 1637581-1639580 Volvox carteri
Vocar.0027s0175 2.0kb downstream 2.0kb downstream 9178 true scaffold_27: 1628403-1637580 Volvox carteri
Vocar.0027s0175 2.0kb downstream 2.0kb downstream 2000 false scaffold_27: 1628403-1630402 Volvox carteri
Vocar.0027s0175 5.0kb upstream 5.0kb upstream 12178 true scaffold_27: 1630403-1642580 Volvox carteri
Vocar.0027s0175 5.0kb upstream 5.0kb upstream 5000 false scaffold_27: 1637581-1642580 Volvox carteri
Vocar.0027s0175 5.0kb downstream 5.0kb downstream 12178 true scaffold_27: 1625403-1637580 Volvox carteri
Vocar.0027s0175 5.0kb downstream 5.0kb downstream 5000 false scaffold_27: 1625403-1630402 Volvox carteri
Vocar.0027s0175 10.0kb upstream 10.0kb upstream 17178 true scaffold_27: 1630403-1647580 Volvox carteri
Vocar.0027s0175 10.0kb upstream 10.0kb upstream 10000 false scaffold_27: 1637581-1647580 Volvox carteri
Vocar.0027s0175 10.0kb downstream 10.0kb downstream 17178 true scaffold_27: 1620403-1637580 Volvox carteri
Vocar.0027s0175 10.0kb downstream 10.0kb downstream 10000 false scaffold_27: 1620403-1630402 Volvox carteri

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112788 5260 Chlorophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain