Gene : Vocar.0003s0039 V. carteri v2.1
Defline:  (1 of 1) PTHR11254:SF73 - E3 UBIQUITIN-PROTEIN LIGASE TRIP12 Genomic Order:  39
Name:  ? Vocar.0003s0039 Secondary Identifier:  ? PAC:32889238
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vcarteri PWY-7511 Volvox carteri pathologic  

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Vocar.0003s0039 0.5kb upstream 0.5kb upstream 13397 true scaffold_3: 413058-426454 Volvox carteri
Vocar.0003s0039 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 413058-413557 Volvox carteri
Vocar.0003s0039 0.5kb downstream 0.5kb downstream 13397 true scaffold_3: 413558-426954 Volvox carteri
Vocar.0003s0039 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 426455-426954 Volvox carteri
Vocar.0003s0039 1.0kb upstream 1.0kb upstream 13897 true scaffold_3: 412558-426454 Volvox carteri
Vocar.0003s0039 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 412558-413557 Volvox carteri
Vocar.0003s0039 1.0kb downstream 1.0kb downstream 13897 true scaffold_3: 413558-427454 Volvox carteri
Vocar.0003s0039 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 426455-427454 Volvox carteri
Vocar.0003s0039 2.0kb upstream 2.0kb upstream 14897 true scaffold_3: 411558-426454 Volvox carteri
Vocar.0003s0039 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 411558-413557 Volvox carteri
Vocar.0003s0039 2.0kb downstream 2.0kb downstream 14897 true scaffold_3: 413558-428454 Volvox carteri
Vocar.0003s0039 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 426455-428454 Volvox carteri
Vocar.0003s0039 5.0kb upstream 5.0kb upstream 17897 true scaffold_3: 408558-426454 Volvox carteri
Vocar.0003s0039 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 408558-413557 Volvox carteri
Vocar.0003s0039 5.0kb downstream 5.0kb downstream 17897 true scaffold_3: 413558-431454 Volvox carteri
Vocar.0003s0039 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 426455-431454 Volvox carteri
Vocar.0003s0039 10.0kb upstream 10.0kb upstream 22897 true scaffold_3: 403558-426454 Volvox carteri
Vocar.0003s0039 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 403558-413557 Volvox carteri
Vocar.0003s0039 10.0kb downstream 10.0kb downstream 22897 true scaffold_3: 413558-436454 Volvox carteri
Vocar.0003s0039 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 426455-436454 Volvox carteri

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109838 5260 Chlorophyte View MSA
123428406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain