Gene : Vocar.0004s0446 V. carteri v2.1
Defline:  (1 of 1) PTHR11946:SF86 - METHIONINE--TRNA LIGASE, CYTOPLASMIC Genomic Order:  446
Name:  ? Vocar.0004s0446 Secondary Identifier:  ? PAC:32889472
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vcarteri TRNA-CHARGING-PWY Volvox carteri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Vocar.0004s0446 0.5kb upstream 0.5kb upstream 10379 true scaffold_4: 3760530-3770908 Volvox carteri
Vocar.0004s0446 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 3770409-3770908 Volvox carteri
Vocar.0004s0446 0.5kb downstream 0.5kb downstream 10379 true scaffold_4: 3760030-3770408 Volvox carteri
Vocar.0004s0446 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 3760030-3760529 Volvox carteri
Vocar.0004s0446 1.0kb upstream 1.0kb upstream 10879 true scaffold_4: 3760530-3771408 Volvox carteri
Vocar.0004s0446 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 3770409-3771408 Volvox carteri
Vocar.0004s0446 1.0kb downstream 1.0kb downstream 10879 true scaffold_4: 3759530-3770408 Volvox carteri
Vocar.0004s0446 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 3759530-3760529 Volvox carteri
Vocar.0004s0446 2.0kb upstream 2.0kb upstream 11879 true scaffold_4: 3760530-3772408 Volvox carteri
Vocar.0004s0446 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 3770409-3772408 Volvox carteri
Vocar.0004s0446 2.0kb downstream 2.0kb downstream 11879 true scaffold_4: 3758530-3770408 Volvox carteri
Vocar.0004s0446 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 3758530-3760529 Volvox carteri
Vocar.0004s0446 5.0kb upstream 5.0kb upstream 14879 true scaffold_4: 3760530-3775408 Volvox carteri
Vocar.0004s0446 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 3770409-3775408 Volvox carteri
Vocar.0004s0446 5.0kb downstream 5.0kb downstream 14879 true scaffold_4: 3755530-3770408 Volvox carteri
Vocar.0004s0446 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 3755530-3760529 Volvox carteri
Vocar.0004s0446 10.0kb upstream 10.0kb upstream 19879 true scaffold_4: 3760530-3780408 Volvox carteri
Vocar.0004s0446 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 3770409-3780408 Volvox carteri
Vocar.0004s0446 10.0kb downstream 10.0kb downstream 19879 true scaffold_4: 3750530-3770408 Volvox carteri
Vocar.0004s0446 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 3750530-3760529 Volvox carteri

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112072 5260 Chlorophyte View MSA
123428788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain