Gene : Vocar.0006s0312 V. carteri v2.1

Defline:  (1 of 3) 2.3.3.16 - Citrate synthase (unknown stereospecificity) / Oxaloacetate transacetase Genomic Order:  312
Name:  ? Vocar.0006s0312 Secondary Identifier:  ? PAC:32894176

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vcarteri GLYOXYLATE-BYPASS Volvox carteri pathologic  
Vcarteri PWY-5464 Volvox carteri pathologic  
Vcarteri PWY-561 Volvox carteri pathologic  
Vcarteri PWY-5690 Volvox carteri pathologic  
Vcarteri PWY-6549 Volvox carteri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Vocar.0006s0312 0.5kb upstream 0.5kb upstream 8443 true scaffold_6: 2964971-2973413 Volvox carteri
Vocar.0006s0312 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2972914-2973413 Volvox carteri
Vocar.0006s0312 0.5kb downstream 0.5kb downstream 8443 true scaffold_6: 2964471-2972913 Volvox carteri
Vocar.0006s0312 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 2964471-2964970 Volvox carteri
Vocar.0006s0312 1.0kb upstream 1.0kb upstream 8943 true scaffold_6: 2964971-2973913 Volvox carteri
Vocar.0006s0312 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2972914-2973913 Volvox carteri
Vocar.0006s0312 1.0kb downstream 1.0kb downstream 8943 true scaffold_6: 2963971-2972913 Volvox carteri
Vocar.0006s0312 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 2963971-2964970 Volvox carteri
Vocar.0006s0312 2.0kb upstream 2.0kb upstream 9943 true scaffold_6: 2964971-2974913 Volvox carteri
Vocar.0006s0312 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2972914-2974913 Volvox carteri
Vocar.0006s0312 2.0kb downstream 2.0kb downstream 9943 true scaffold_6: 2962971-2972913 Volvox carteri
Vocar.0006s0312 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 2962971-2964970 Volvox carteri
Vocar.0006s0312 5.0kb upstream 5.0kb upstream 12943 true scaffold_6: 2964971-2977913 Volvox carteri
Vocar.0006s0312 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2972914-2977913 Volvox carteri
Vocar.0006s0312 5.0kb downstream 5.0kb downstream 12943 true scaffold_6: 2959971-2972913 Volvox carteri
Vocar.0006s0312 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 2959971-2964970 Volvox carteri
Vocar.0006s0312 10.0kb upstream 10.0kb upstream 17943 true scaffold_6: 2964971-2982913 Volvox carteri
Vocar.0006s0312 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2972914-2982913 Volvox carteri
Vocar.0006s0312 10.0kb downstream 10.0kb downstream 17943 true scaffold_6: 2954971-2972913 Volvox carteri
Vocar.0006s0312 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 2954971-2964970 Volvox carteri

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110607 5260 Chlorophyte View MSA
123424186 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain