Gene : 405348 S. moellendorffii v1.0
Defline:  (1 of 1) PTHR31375:SF28 - POLYGALACTURONASE QRT2 Genomic Order:  667
Name:  ? 405348 Secondary Identifier:  ? PAC:15412371
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Smoellendorffii PWY-1081 Selaginella moellendorffii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
405348 0.5kb upstream 0.5kb upstream 3500 true scaffold_3: 3920045-3923544 Selaginella moellendorffii
405348 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 3923045-3923544 Selaginella moellendorffii
405348 0.5kb downstream 0.5kb downstream 3500 true scaffold_3: 3919545-3923044 Selaginella moellendorffii
405348 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 3919545-3920044 Selaginella moellendorffii
405348 1.0kb upstream 1.0kb upstream 4000 true scaffold_3: 3920045-3924044 Selaginella moellendorffii
405348 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 3923045-3924044 Selaginella moellendorffii
405348 1.0kb downstream 1.0kb downstream 4000 true scaffold_3: 3919045-3923044 Selaginella moellendorffii
405348 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 3919045-3920044 Selaginella moellendorffii
405348 2.0kb upstream 2.0kb upstream 5000 true scaffold_3: 3920045-3925044 Selaginella moellendorffii
405348 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 3923045-3925044 Selaginella moellendorffii
405348 2.0kb downstream 2.0kb downstream 5000 true scaffold_3: 3918045-3923044 Selaginella moellendorffii
405348 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 3918045-3920044 Selaginella moellendorffii
405348 5.0kb upstream 5.0kb upstream 8000 true scaffold_3: 3920045-3928044 Selaginella moellendorffii
405348 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 3923045-3928044 Selaginella moellendorffii
405348 5.0kb downstream 5.0kb downstream 8000 true scaffold_3: 3915045-3923044 Selaginella moellendorffii
405348 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 3915045-3920044 Selaginella moellendorffii
405348 10.0kb upstream 10.0kb upstream 13000 true scaffold_3: 3920045-3933044 Selaginella moellendorffii
405348 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 3923045-3933044 Selaginella moellendorffii
405348 10.0kb downstream 10.0kb downstream 13000 true scaffold_3: 3910045-3923044 Selaginella moellendorffii
405348 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 3910045-3920044 Selaginella moellendorffii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121318031 5274 Embryophyte Singleton cluster - no MSA
123355135 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain